Input parameters:

  Query = ENSDARP00000071531 (Len=320)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000071531, Len=320):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYD 80  
WD40-rpts       (_________________WD 1_________________)(____________________WD 2______________

Query       81 RKVIIWKEENSTWDKMYEYTGHDSSVNSVCWGPYDFGLILACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAP 160 
WD40-rpts      ______)     (__________________WD 3_________________)(__________________________

Query      161 AVVPGSLIEQPTGQKPNYIKRFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF 240 
WD40-rpts      __WD 4____________________________)     (___________________WD 5________________

Query      241 IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACISDVNKGQGAVSSITDSQQSEQ 320 
WD40-rpts      __)(____________________WD 6____________________)                               

6 WD40-repeats found in QUERY=ENSDARP00000071531 (Len=320):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-41       9.16  493.00  1.4e-05       20.0%     51.43
  WD 2:  Seg  5    42-87       7.50  424.66  0.00012       27.5%     53.67
  WD 3:  Seg  9    93-133      8.18  452.58  4.9e-05       37.5%     54.40
  WD 4:  Seg 13   134-195      6.89  399.08  0.00026       35.0%     53.68
  WD 5:  Seg 17   201-243      7.45  422.57  0.00013       25.0%     54.01
  WD 6:  Seg 21   244-289      8.10  449.46  5.4e-05       22.5%     53.91

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-41     VS-----V------INTVDTSHEDMIHDAQMDYY----G-----------------TRLATCSSDRSVKIFD
   WD 2   42-87     VK-----N--GGQILVADLRGHEGPVWQVAWAHP--MYG-----------------NILASCSYDRKVIIWK
   WD 3   93-133    -W-----D------KMYEYTGHDSSVNSVCWGPY--DFG-----------------LILACGSSDGAISVLT
   WD 4  134-195    CSGDGHWD------IKKINNAHTIGCNAVSWAPA----VVPGSLIEQPTGQKPNYIKRFVSGGCDNLVKLWK
   WD 5  201-243    -W-----K------EDQKLEAHSDWVRDVGWAPSIGLPT-----------------STIASCSQDGRVFIWT
   WD 6  244-289    CD-----DPAGNTWTAKLLHKFNDVVWHVSWSIT----G-----------------NILAVSGGDNKVTLWK

   WD40 Template    TG-----E------CLRTLSGHTSGVTSVSFSPD----G-----------------KRLVSGSEDGTIKVWD