Input parameters:

  Query = ENSDARP00000071650 (Len=425)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000071650, Len=425):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGKRRAPELYRAPFPLYTVKMDPRTGLIITAGGGGASKTGIKNAVHFLSLDLVGGAHSATLLHTHETDTRATMNMCLGGD 80  
WD40-rpts      (__________________WD 1_________________)              (_________________WD 2___

Query       81 VMAAGQDDTCRLMKFSLHEAKHNKKPAAKDGTGDKGGARKRAGKGQNADGGEGDAAQMKQDSTQISVQDLGSVQADFSPQ 160 
WD40-rpts      _____________)        (_________________WD 3________________)        (__________

Query      161 DPCVKCVRFSLDLTLLLSGGADGFVRVWEFPSLKEKLNFRAHKDELEDIDISPDKKHIVTVGRDFECSVWSGDQLAVGLC 240 
WD40-rpts      _______WD 4_________________)   (_________________WD 5________________)   (_____

Query      241 WHENMPQITEKTYRYKACRFAKVEDQKDALRLYTVQIPHKRDRKPPPCYITKWDGRAFLPLLTKPCGNEVISCLTASDSG 320 
WD40-rpts      ____________WD 6________________)                        (_________________WD 7_

Query      321 TFLGLGTVTGSVAIYIAFSLQKLYYIQESHGIVVTDLTFLPDAPKTKAVKGDNEVVMLSVAVDSRCQVHAVSNRSPFPLW 400 
WD40-rpts      _______________)    (_________________WD 8________________)                     

Query      401 LVLFFCGLMVVAVILLLQSFFPGFI 425 
WD40-rpts                               

8 WD40-repeats found in QUERY=ENSDARP00000071650 (Len=425):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-41       5.82  355.11  0.00102       15.0%     32.10
  WD 2:  Seg  4    56-94       7.90  440.83  7.1e-05       12.5%     51.06
  WD 3:  Seg  7   103-141      6.53  384.33  0.00041       12.5%     26.08
  WD 4:  Seg 11   150-189     10.92  565.62  1.5e-06       35.0%     57.11
  WD 5:  Seg 15   193-231      9.08  489.93  1.6e-05       22.5%     55.26
  WD 6:  Seg 19   235-273      4.62  305.54  0.00474        5.0%     37.03
  WD 7:  Seg 23   298-336      8.25  455.51  4.5e-05       17.5%     58.23
  WD 8:  Seg 27   341-379      7.50  424.59  0.00012       17.5%     51.00

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-41     MGKRRAPELYRAPFPLYTVKMDPRTGLIITAGGGGASKTGI
   WD 2   56-94     -AHSAT-LLHTHETDTRATMNMCLGGDVMAAGQDDTCRLMK
   WD 3  103-141    -NKKPA-AKDGTGDKGGARKRAGKGQNADGGEGDAAQMKQD
   WD 4  150-189    LGSVQA-DFSPQDPCVKCVRFSLDLTLLLSGGADGFVRVWE
   WD 5  193-231    -LKEKL-NFRAHKDELEDIDISPDKKHIVTVGRDFECSVWS
   WD 6  235-273    -LAVGL-CWHENMPQITEKTYRYKACRFAKVEDQKDALRLY
   WD 7  298-336    -FLPLL-TKPCGNEVISCLTASDSGTFLGLGTVTGSVAIYI
   WD 8  341-379    -QKLYY-IQESHGIVVTDLTFLPDAPKTKAVKGDNEVVMLS

   WD40 Template    TGECLR-TLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD