Input parameters:

  Query = ENSDARP00000074797 (Len=501)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000074797, Len=501):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFTDETLDLVGAESTWRKSHQQTQESRSCQTRPVHTTETETQAKDVSENGTQTQDQSGQTLSLDRDLTDFPGLLDFMRRA 80  
WD40-rpts                                                                                      

Query       81 EDVVIRELVKNSKSHAFDGFEVNWEEQNESVSCMYRLQHVDAQEKSLQVTSVSWNCTGSVIACGFGRVDDGDWSNEKACV 160 
WD40-rpts                                                                                      

Query      161 CTWNVDRQNLNPKRPDVIIDVATPVMCLCFHPVRPSVVAGGLYSGEVVVWDTSRSQDLILAQTGMSADTHREPVYQINWV 240 
WD40-rpts          (_____________________WD 1____________________)         (___________________

Query      241 PGARRGEFSVLSAGSGGRVLLWTIDGSEAKLLLSSGYALVRQQMPQSGAASKTRGSLTIGVTAVALSPWDLDTFLVGSEG 320 
WD40-rpts      WD 2__________________)                                                         

Query      321 GLVLKCSFSSETAAAVPSDGESVILRAPMQFSFSPRGGPIHSVHFSPFHRNLFVSVGTDGLAHLHSVLQPCPLLALRVSD 400 
WD40-rpts                                (_________________WD 3_________________)(_____________

Query      401 SYVFGVRWSPTRPLVFAAVTGQGLVQMFDLGRRSLRPVATIDQNAGGQPAYCLEFNPKHTNLLAVGNADGSVNIWQLSAE 480 
WD40-rpts      ______WD 4__________________)(_____________________WD 5____________________)    

Query      481 LTEQGAKETAMLEQLANEVAD 501 
WD40-rpts                           

5 WD40-repeats found in QUERY=ENSDARP00000074797 (Len=501):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   165-211      3.18  245.98  0.02974       20.0%     44.08
  WD 2:  Seg 11   221-263      4.60  304.81  0.00485       17.5%     38.04
  WD 3:  Seg 20   347-386      4.95  319.07  0.00312       27.5%     47.67
  WD 4:  Seg 24   387-429      3.90  275.91  0.01185       22.5%     54.93
  WD 5:  Seg 28   430-476      3.40  254.96  0.02259       20.0%     57.35

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  165-211    VDRQNLNPK------RPDVIIDVATPVMCLCFHPVRPSV----V-AGGLYSGEVVVWD
   WD 2  221-263    -A------Q------TGMSADTHREPVYQINWVP-GARRGEFSV-LSAGSGGRVLLWT
   WD 3  347-386    -A------P------MQFSFSPRGGPIHSVHFSP-FHRN----LFVSVGTDGLAHLHS
   WD 4  387-429    VL------Q----PCPLLALRVSDSYVFGVRWSP-TRPL----VFAAVTGQGLVQMFD
   WD 5  430-476    LG------RRSLRPVATIDQNAGGQPAYCLEFNPKHTNL----L-AVGNADGSVNIWQ

   WD40 Template    TG------E------CLRTLSGHTSGVTSVSFSP-DGKR----L-VSGSEDGTIKVWD