Input parameters:

  Query = ENSDARP00000075778 (Len=426)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000075778, Len=426):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSDEQNHLVI 80  
WD40-rpts                              (___________________WD 1___________________)  (_________

Query       81 ASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSK 160 
WD40-rpts      ________WD 2_________________)           (_____________WD 3_____________)       

Query      161 PDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE 240 
WD40-rpts            (_________________WD 4_________________)(______________________WD 5_______

Query      241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEI 320 
WD40-rpts      _______________)      (_________________WD 6_________________)(_________________

Query      321 FQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400 
WD40-rpts      __WD 7___________________)(__________________________WD 8_______________________

Query      401 VWQMAENIYNDEEPDTPASELEGQAS 426 
WD40-rpts      __)                       

8 WD40-repeats found in QUERY=ENSDARP00000075778 (Len=426):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    25-68       3.37  253.68  0.02350       15.0%     16.35
  WD 2:  Seg  4    71-110      5.33  334.79  0.00191       10.0%     -21.71
  WD 3:  Seg  6   122-153      3.62  264.17  0.01702       12.5%     44.07
  WD 4:  Seg  9   167-206      6.20  370.97  0.00062       32.5%     49.66
  WD 5:  Seg 13   207-256      6.12  367.29  0.00070       27.5%     50.79
  WD 6:  Seg 17   263-302      7.42  421.36  0.00013       32.5%     54.26
  WD 7:  Seg 21   303-346      6.94  401.53  0.00024       27.5%     51.61
  WD 8:  Seg 25   347-403      5.84  356.08  0.00099       32.5%     55.41

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   25-68     KN----------------TPFLYDLVMTHALEWPSLTVQWLPDVN-R-P-EGKDYVVHRLVLG
   WD 2   71-110    TS----------------DE----QNHLVIASVQIPNDDAQFDAS-H-Y-DSEKGAEFGGFGS
   WD 3  122-153    -----------------------------NHEGEVNRARYMPQNPCI-I-ATKTPTSDVLVFD
   WD 4  167-206    -C----------------SP----DLRLRGHQKEGYGLSWNPNLSGN-L-LSASDDHTICLWD
   WD 5  207-256    IS-------GAPKEGKIVDA----KTIFTGHTAVVEDVSWHLLHE-S-LFGSVADDQKLMIWD
   WD 6  263-302    -S----------------KP----SHSVDAHTAEVNCLSFNPYSEFI-L-ATGSADKTVALWD
   WD 7  303-346    LR----------------NL-KLKLHSFESHKDEIFQVQWSPHNE-TIL-ASSGTDRRLNVWD
   WD 8  347-403    LSKIGEEQSAEDAEDGPPEL----LFIHGGHTAKISDFSWNPNEPWV-I-CSVSEDNIMQVWQ

   WD40 Template    TG----------------EC----LRTLSGHTSGVTSVSFSPDGK-R-L-VSGSEDGTIKVWD