Input parameters:

  Query = ENSDARP00000075940 (Len=395)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000075940, Len=395):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 ETWSARFSPDGSYFAWSMGFGVIKLLPWPLTTREYSIKGINQRFSNQYSLELPKKSLQYSAESCCSKEKILNCRFLVWAL 80  
WD40-rpts      (___________WD 1__________)             (_________________WD 2________________) 

Query       81 AFGPCTSTRVDSAHQHRREHELLLAAGLHNGSIQVWLVSTGNLQFTLTGHQAPVRDLVFAPNGSLTLISASRDKTLRIWD 160 
WD40-rpts        (_______________WD 3______________)   (_________________WD 4_________________)

Query      161 LGKKGASPHVLRGPNYWVFRCAVSPDSSVIASVCNLDSKVYLWSLRSYTFMKHLTYDHERTMASCDFSQDGALLAIASYH 240 
WD40-rpts          (_________________WD 5_________________)   (___________________WD 6_________

Query      241 SNTGWWLDLWDPYTADLLTRVQYIVSHLFFPCRDCEVCAYRSDNLLTSLSFSPVALLLAFKDYRALQIWDVERDKLVADT 320 
WD40-rpts      __________)                         (______________WD 7______________)   (______

Query      321 DHNRAGGVCCAFHPQGGVIATGCRDGHVKFWKVPHLVPSLRHLCRVALRFSISTYQVEALPLPTKILEYLTYRDI 395 
WD40-rpts      ___________WD 8________________)                                           

8 WD40-repeats found in QUERY=ENSDARP00000075940 (Len=395):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-27       4.95  319.22  0.00310       22.5%     40.04
  WD 2:  Seg  5    41-79       5.89  357.90  0.00093       10.0%     37.39
  WD 3:  Seg  9    83-117      6.00  362.62  0.00081       22.5%     43.61
  WD 4:  Seg 13   121-160      9.25  496.83  1.3e-05       40.0%     55.12
  WD 5:  Seg 17   165-204      7.70  432.82  9.1e-05       25.0%     51.42
  WD 6:  Seg 21   208-251      6.71  391.79  0.00033       27.5%     52.27
  WD 7:  Seg 26   277-310      6.26  373.22  0.00058       22.5%     45.68
  WD 8:  Seg 29   314-352      9.41  503.52  1.0e-05       22.5%     55.16

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-27     --------------ETWSARFSPDGS-YFAW-SMGFGV----IKLLP
   WD 2   41-79     NQR-FSNQY-SLELPKKSLQYSAESC-CSKE-KILNCR----FLVWA
   WD 3   83-117    -GPCTSTRV-DSAHQH----RREHEL-LLAA-GLHNGS----IQVWL
   WD 4  121-160    -GNLQFTLT-GHQAPVRDLVFAPNGSLTLIS-ASRDKT----LRIWD
   WD 5  165-204    -GASPHVLR-GPNYWVFRCAVSPDSS-VIASVCNLDSK----VYLWS
   WD 6  208-251    -YTFMKHLTYDHERTMASCDFSQDGA-LLAI-ASYHSNTGWWLDLWD
   WD 7  277-310    -----VCAY-RSDNLLTSLSFSPVAL-LLAF-KD-YRA----LQIWD
   WD 8  314-352    -DKLVADTD-HNRAGGVCCAFHPQGG-VIAT-GCRDGH----VKFWK

   WD40 Template    TGECLRTLS-GHTSGVTSVSFSPDGK-RLVS-GSEDGT----IKVWD