Input parameters:

  Query = ENSDARP00000076048 (Len=514)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000076048, Len=514):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIES 80  
WD40-rpts                                                                                      

Query       81 LSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAPSATSANMQGNAKNGENTANGEENGAHALPNNHADMMEVDGDVEIPQNK 160 
WD40-rpts                                       (_________________WD 1_________________)    (__

Query      161 AMVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSSSSSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLA 240 
WD40-rpts      _______________WD 2________________)                (_________________WD 3______

Query      241 TGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSVAPALDVDWQSNN 320 
WD40-rpts      ___________)  (_________________WD 4________________)   (_________________WD 5__

Query      321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWS 400 
WD40-rpts      ______________)   (_________________WD 6________________)   (___________________

Query      401 PTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQTGALVHSY 480 
WD40-rpts      __WD 7_____________________)   (_________________WD 8________________)   (______

Query      481 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK 514 
WD40-rpts      __________WD 9________________)   

9 WD40-repeats found in QUERY=ENSDARP00000076048 (Len=514):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   114-153      4.67  307.76  0.00443       12.5%     11.39
  WD 2:  Seg  4   158-196      9.01  486.94  1.7e-05       32.5%     44.94
  WD 3:  Seg  9   213-252      9.97  526.34  5.0e-06       25.0%     38.72
  WD 4:  Seg 12   255-293      9.54  508.65  8.7e-06       25.0%     51.99
  WD 5:  Seg 16   297-335      8.06  447.61  5.8e-05       20.0%     53.07
  WD 6:  Seg 20   339-377     10.18  535.03  3.8e-06       35.0%     55.74
  WD 7:  Seg 24   381-428      8.31  457.78  4.2e-05       32.5%     56.18
  WD 8:  Seg 28   432-470     10.71  557.15  1.9e-06       47.5%     55.00
  WD 9:  Seg 32   474-511      7.63  429.69  0.00010       22.5%     54.94

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  114-153    -ATSANMQGNAKNGENTANGEENGAH---------ALPNNHADMMEVDGD
   WD 2  158-196    -QNKAMVLRGHESEVFICAWNPVS-D---------LLASGSGDSTARIWN
   WD 3  213-252    CIREGGQDVPSNKDVTSLDWNSEG-T---------LLATGSYDGFARIWT
   WD 4  255-293    -GNLASTLGQHKGPIFALKWNKKG-N---------FILSAGVDKTTIIWD
   WD 5  297-335    -GEAKQQFPFHSVAPALDVDWQSN-N---------TFASCSTDMCIHVCK
   WD 6  339-377    -DRPIKTFQGHTNEVNAIKWDPTG-N---------LLASCSDDMTLKIWS
   WD 7  381-428    -DTCVHDLQAHSKEIYTIKWSPTG-PGTNNPNANLMLASASFDSTVRLWD
   WD 8  432-470    -GICIHTLTKHQEPVYSVAFSPDG-R---------HLASGSFDKCVHIWN
   WD 9  474-511    -GALVHSYRGT-GGIFEVCWNAAG-D---------KVGASASDGSVCVLD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDG-K---------RLVSGSEDGTIKVWD