Input parameters:

  Query = ENSDARP00000076262 (Len=471)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000076262, Len=471):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEVCQSLPLDCLISVFALLQDEDLLTASVVCKEWHYAAETPWLWRRMCLQRWSFCNVSQLLSDTGMPSWKGYFQRRSHLE 80  
WD40-rpts                                                     (_________________WD 1___________

Query       81 NKMKTGRSTADYTCKSLRGHKGRVVGFAYLAGNDGCSDVWTCTPVVCSASTDGTIKAWDIQKGVNLWTSPVQDPLQDMTV 160 
WD40-rpts      ______)   (______________________WD 2_____________________)   (________________W

Query      161 DTVQSVIITSDSKGTIKTWKGATGEEQACFNSGFSRSTLLAFSNKDDSSFLMVGSILGSLLVLSLPALSEVSRHVVCDSF 240 
WD40-rpts      D 3________________)   (__________________WD 4_________________)    (___________

Query      241 MLNLLLSAPDKKWIFAASKENFDLSPKVFYSDSVCNPDEDSVCCSLPVTGCCAAVFLPSQAARLAVIHSDGLFRNKTLSV 320 
WD40-rpts      ______WD 5________________)            (___________________WD 6_________________

Query      321 FDLTMKESKYKREPHAQQVASFQVDLSHRSDVILQARGSSTVLLADGNHLKVYTIKGELVASFEDHLQPITALCVDSFRV 400 
WD40-rpts      _)          (__________________WD 7__________________)  (________________WD 8___

Query      401 VTASRDLSLRVLTWRTDPEHGLSLESQYHLLGGSHTRSRGFTNVACDYSSIVASVESLDGKDVLKAYTFDF 471 
WD40-rpts      ____________)  (_________________WD 9_________________)                

9 WD40-repeats found in QUERY=ENSDARP00000076262 (Len=471):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    48-87       3.03  239.65  0.03608        7.5%      5.56
  WD 2:  Seg  4    91-139      6.56  385.81  0.00039       32.5%     53.06
  WD 3:  Seg  8   143-180      6.71  391.98  0.00032       20.0%     47.97
  WD 4:  Seg 12   184-224      6.81  395.99  0.00029       25.0%     53.97
  WD 5:  Seg 16   229-267      7.38  419.40  0.00014       15.0%     49.48
  WD 6:  Seg 20   280-322      5.60  346.10  0.00135       17.5%     51.33
  WD 7:  Seg 25   333-374      6.28  374.15  0.00056       15.0%     44.68
  WD 8:  Seg 29   377-413      6.81  396.01  0.00029       25.0%     53.17
  WD 9:  Seg 33   416-455      5.46  340.19  0.00162        7.5%     21.79

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   48-87     CL--QRWSFCNVSQL--LSDTGMPS----------WKGYFQRRSHL----ENKMKTGR
   WD 2   91-139    -D--YTCKSLRGHKG--RVVGFAYLAGNDGCSDVWTCTPVVCSAST----DGTIKAWD
   WD 3  143-180    -G--VNLWTSPVQDP---LQDMTVD----------TVQSVIITSDS----KGTIKTWK
   WD 4  184-224    -G--EEQACFNSGFSRSTLLAFSNK----------DDSSFLMVGSI----LGSLLVLS
   WD 5  229-267    -S--EVSRHVVCDSF--MLNLLLSA----------PDKKWIFAASK----ENFDLSPK
   WD 6  280-322    -D--SVCCSLPVTGC--CAAVFLPS----------QAARLAVIHSDGLFRNKTLSVFD
   WD 7  333-374    EPHAQQVASFQVDLS--HRSDVILQ----------ARGSSTVLLAD----GNHLKVYT
   WD 8  377-413    -G--ELVASFEDHLQ--PITALCV------------DSFRVVTASR----DLSLRVLT
   WD 9  416-455    TD--PEHGLSLESQY--HLLGGSHT----------RSRGFTNVACD----YSSIVASV

   WD40 Template    TG--ECLRTLSGHTS--GVTSVSFS----------PDGKRLVSGSE----DGTIKVWD