Input parameters:

  Query = ENSDARP00000076761 (Len=416)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000076761, Len=416):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDNPNPDDNPDPELEDTLQLHEDEEIELEDTPQSPDALADELEDVCVADDDDDDGWQTEDELMESEQDDSELTFTRHTGS 80  
WD40-rpts                         (_____________________WD 1_____________________)(____________

Query       81 VFCVRLDPLTNSLAMSGGEDDRAFLWRVCDGEVLLECTGHKDSVVCVGFSSDSALAASGDMSGVIRVWSVEKREEVWSAE 160 
WD40-rpts      _____WD 2_________________)   (_________________WD 3________________)(__________

Query      161 VGDLEWLEWHPCAPVLLAGVADGSVWMWKLPSGACRTFQSPGCQTTCGRILPDGKRAIVGYEDGSLRLWDLKQGTAIYVI 240 
WD40-rpts      _______WD 4_________________)  (_________________WD 5________________)(_________

Query      241 KGQDGHRGALTCVSSNQEGALLLSGSVDGQAKLISSSSGKVLCSFSSQTSEGSGSAQDSNSVESVGFCNVLPLAAVAYLD 320 
WD40-rpts      ___________WD 6___________________)          (__________________WD 7____________

Query      321 GTLAIYDLNTHTLRHQCKHEVGVVQLQWEAESAVVCTCSLSGVLSLWDARSGVLVSEFHGHSAEILDFVLNREASVAVTA 400 
WD40-rpts      ______)  (_________________WD 8________________)   (_________________WD 9_______

Query      401 GGDHKAKVFCLQRPDR 416 
WD40-rpts      _________)      

9 WD40-repeats found in QUERY=ENSDARP00000076761 (Len=416):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    20-67       3.80  271.55  0.01356       15.0%     12.99
  WD 2:  Seg  5    68-107      7.92  441.82  6.9e-05       30.0%     48.57
  WD 3:  Seg  9   111-149     10.06  530.42  4.4e-06       40.0%     56.25
  WD 4:  Seg 13   150-189      9.41  503.54  1.0e-05       17.5%     53.70
  WD 5:  Seg 17   192-230      9.44  504.53  9.9e-06       35.0%     54.99
  WD 6:  Seg 21   231-275      8.61  470.49  2.8e-05       32.5%     48.74
  WD 7:  Seg 26   286-327      7.54  426.09  0.00011       20.0%     40.69
  WD 8:  Seg 29   330-368      8.53  467.05  3.2e-05       22.5%     54.82
  WD 9:  Seg 33   372-410      8.70  473.84  2.6e-05       17.5%     53.16

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   20-67     LHE-----D--EEIELEDTPQSPDALADELEDVCVADDDDDD-GWQTEDELMESEQ
   WD 2   68-107    -DD-----S--EL------TFTR--HTGSVFCVRLDPLTNSLAMSGGEDDRAFLWR
   WD 3  111-149    -GE-----V--LL------ECTG--HKDSVVCVGFSSDSALA-ASGDMSGVIRVWS
   WD 4  150-189    VEK-----R--EE------VWSA--EVGDLEWLEWHPCAPVL-LAGVADGSVWMWK
   WD 5  192-230    -SG-----A--CR------TFQS--PGCQTTCGRILPDGKRA-IVGYEDGSLRLWD
   WD 6  231-275    LKQGTAIYV--IK------GQDG--HRGALTCVSSNQEGALL-LSGSVDGQAKLIS
   WD 7  286-327    SSQ-----TSEGS------GSAQ--DSNSVESVGFCNVLPLA-AVAYLDGTLAIYD
   WD 8  330-368    -TH-----T--LR------HQCK--HEVGVVQLQWEAESAVV-CTCSLSGVLSLWD
   WD 9  372-410    -GV-----L--VS------EFHG--HSAEILDFVLNREASVA-VTAGGDHKAKVFC

   WD40 Template    TGE-----C--LR------TLSG--HTSGVTSVSFSPDGKRL-VSGSEDGTIKVWD