Input parameters:

  Query = ENSDARP00000077651 (Len=902)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000077651, Len=902):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTAEEIINVKEVEIIKVMLDFLNSRKLHISMLALEKESGVINGLYSDDMLFLRQLILDGQWDEVLQFIQPLECLDKFDRK 80  
WD40-rpts                                                                                      

Query       81 RFRYIVLKQKFLEALCVNNAMSAEDEPQHLELTMQEAVKCLHALEEFCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTA 160 
WD40-rpts                                                                                      

Query      161 RVQCFEESCGMVAEFIPADRKLSEAGFRASSNRLFQLLIKGVLYECCVEFCQSKATGEEITESEVLLGIDMLCGNGCDDL 240 
WD40-rpts                                                                                      

Query      241 DLSLLSWLQNLSPSVFSCAFEQKMLNIHVDRLVKPAKAAYADLLTPLISKLSPYPASPLRRPQSADTYMSRSLNPALDGL 320 
WD40-rpts                                                                                      

Query      321 SYGLSQEKRGVTTDGGKTSPMSHSFANFQHMNRSVMMENSGCHSIFEESPESSRTETPSDKMMSSPGPQNSRPASAPGQD 400 
WD40-rpts                                                                                      

Query      401 APTPGSEEKNELRDSTDQFQEYYRQRLRVQQHLEQKQQQRELYQQMLREGGVQQHEAPPTAKHNLTEAFLTRSIQRLEEL 480 
WD40-rpts                                                                                      

Query      481 NVGMDDLGEEVQALSQQCKEGTNSNGEVGDASATPQTQDGGGGASSVMTSTPQRSASQSGFPPSSQSPVLTKSAQKDKTG 560 
WD40-rpts                                                         (_________________WD 1_______

Query      561 QNDSLTRSKGPEKEKTKAKFVMVNTLEDTQAVRAVAFHPTGALYAVGSNSKTLRVCAYPDTLDTSGTGTNKPPVIRFKRN 640 
WD40-rpts      _________)              (______________WD 2_____________)                (______

Query      641 KHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNPETCNATGPDLEFSMHDGTIRDLAFMEGPECGGAILISAGAGDCNI 720 
WD40-rpts      ___________WD 3________________)(_______________________WD 4____________________

Query      721 YTTDCQRGQGLHALSGHTGHILSLYTWGGWMIASGSQDKTVRFWDLRVPSCVRVVGTAFQGSGSPVASVAVDPSGRLLAT 800 
WD40-rpts      ___)   (________________WD 5________________)         (________________WD 6_____

Query      801 GQEDSSCMLYDIRGGRMVQTYKPHSSDVRSVRFSPGAHYLLTGSYDNKVIVTDLQGDLTKQLPLTVVGEHGDKVIQCRWH 880 
WD40-rpts      __________)   (_________________WD 7________________)       (_________________WD

Query      881 SHHLSFLSSSADRTVTLWTQAT 902 
WD40-rpts       8________________)   

8 WD40-repeats found in QUERY=ENSDARP00000077651 (Len=902):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   532-570      5.19  328.94  0.00229       12.5%      6.12
  WD 2:  Seg  5   585-617      6.63  388.44  0.00036       27.5%     45.74
  WD 3:  Seg  8   634-672      7.73  433.83  8.9e-05       27.5%     45.84
  WD 4:  Seg 11   673-724      5.15  327.50  0.00240       17.5%     42.91
  WD 5:  Seg 14   728-765      8.86  480.69  2.1e-05       40.0%     52.34
  WD 6:  Seg 19   775-811      8.73  475.10  2.5e-05       32.5%     46.10
  WD 7:  Seg 22   815-853      9.69  514.91  7.1e-06       40.0%     57.26
  WD 8:  Seg 26   861-899      7.18  411.40  0.00018       20.0%     50.59

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  532-570    -PQRS-------ASQSGFPPSSQSPVLTKSAQ-----KDKTGQNDSLTRSKG
   WD 2  585-617    T--------------LEDTQAVRAVAFHPTGA-----LYAVGSNSKTLRVCA
   WD 3  634-672    -VIRF-------KRNKHHKGSIYCVAWSPCGQ-----LLATGSNDKYVKVLP
   WD 4  673-724    FNPETCNATGPDLEFSMHDGTIRDLAFMEGPECGGAILISAGAGDCNIYTTD
   WD 5  728-765    -GQGL-------HALSGHTGHILSL-YTWGGW-----MIASGSQDKTVRFWD
   WD 6  775-811    VG----------TAFQGSGSPVASVAVDPSGR-----LLATGQEDSSCMLYD
   WD 7  815-853    -GRMV-------QTYKPHSSDVRSVRFSPGAH-----YLLTGSYDNKVIVTD
   WD 8  861-899    -QLPL-------TVVGEHGDKVIQCRWHSHHL-----SFLSSSADRTVTLWT

   WD40 Template    TGECL-------RTLSGHTSGVTSVSFSPDGK-----RLVSGSEDGTIKVWD