Input parameters:

  Query = ENSDARP00000077653 (Len=437)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000077653, Len=437):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLLEGGVHPPDQPTDTAQHNLTQKFLNRSIQKLEELNVGMEDLGEDVQALAQQCNGTSASESSKQTPETGPGRIKTAVIS 80  
WD40-rpts                                       (________________WD 1________________)   (_____

Query       81 STPHKGGVRGIPSLDESPVLVNQSVFQDEKPKSPFIAVQTLEDTQAVRAVAFHPSGMLYAIGSNSKTLRVCTYPQSLKTS 160 
WD40-rpts      ____________WD 2________________)(_________________WD 3________________)        

Query      161 PQAPVKQPDICFKRIKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNADTCNATGPDLEFSMHDGTIRDLAFMEGPES 240 
WD40-rpts              (_________________WD 4________________)        (___________________WD 5_

Query      241 GGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILSLYTWGGWMIASGSQDKTVRFWDLRVPSCVKVVGTTLHGTGSA 320 
WD40-rpts      __________________)   (________________WD 6________________)         (__________

Query      321 VASVAIDPSGRLMATGLEDCRCMLYDIRGGRSVQVYRPHSSDVRSVRFSPGAHYLLTGSYDSRVMISDLQGDLTKNLPVT 400 
WD40-rpts      ______WD 7_______________)   (_________________WD 8________________)       (____

Query      401 VVAEHADKVIQCRWHTRDLSFLSSSADKTVTLWAHQT 437 
WD40-rpts      _____________WD 9________________)   

9 WD40-repeats found in QUERY=ENSDARP00000077653 (Len=437):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    34-71       5.67  348.72  0.00124       15.0%     37.47
  WD 2:  Seg  7    75-113      7.71  432.99  9.1e-05       17.5%     29.92
  WD 3:  Seg 10   114-152      8.51  466.16  3.2e-05       30.0%     55.14
  WD 4:  Seg 14   169-207      8.51  466.35  3.2e-05       30.0%     52.10
  WD 5:  Seg 19   216-259      7.12  408.58  0.00019       27.5%     44.61
  WD 6:  Seg 22   263-300      8.85  480.23  2.1e-05       40.0%     53.89
  WD 7:  Seg 27   310-346      8.90  482.37  2.0e-05       35.0%     46.60
  WD 8:  Seg 30   350-388      9.68  514.65  7.2e-06       35.0%     57.78
  WD 9:  Seg 34   396-434      8.34  459.24  4.0e-05       17.5%     54.32

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   34-71     -EELNVGMEDLGEDVQALAQ-----QCNGT-SASESSKQTPETGP
   WD 2   75-113    -KTAVISSTPHKGGVRGIPS-----LDESPVLVNQSVFQDEKPKS
   WD 3  114-152    PFIAVQTL-EDTQAVRAVAF-----HPSGMLYAIGSNSKTLRVCT
   WD 4  169-207    -DICFKRIKHHKGSIYCVAW-----SPCGQLLATGSNDKYVKVLP
   WD 5  216-259    TGPDL-EFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTD
   WD 6  263-300    -GQGLHALSGHTGHILSL-Y-----TWGGWMIASGSQDKTVRFWD
   WD 7  310-346    VGT---TLHGTGSAVASVAI-----DPSGRLMATGLEDCRCMLYD
   WD 8  350-388    -GRSVQVYRPHSSDVRSVRF-----SPGAHYLLTGSYDSRVMISD
   WD 9  396-434    -NLPVTVVAEHADKVIQCRW-----HTRDLSFLSSSADKTVTLWA

   WD40 Template    TGECLRTLSGHTSGVTSVSF-----SPDGKRLVSGSEDGTIKVWD