Input parameters:

  Query = ENSDARP00000079302 (Len=789)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000079302, Len=789):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKEARGCSMRSAVGFLSRRTIDGHPQLKEEFQRRRLSGCSSLYKKDMLGHFGCVNAIEFSNNGGQWLVSGGDDRRVLLWH 80  
WD40-rpts                                              (_________________WD 1_________________)

Query       81 MEKAIHSRAKPMKLKGEHLSNIFCLAFDSTNKRVFSGGNDEQVILHDVERGETLNVFLHDDAVYGLSVSPVNDNVFASSS 160 
WD40-rpts              (_________________WD 2________________)(__________________WD 3__________

Query      161 DDGRVLIWDTREPPHGEPFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPRSSLLRYGGSLSLQSAMSVRFN 240 
WD40-rpts      ________)(____________________WD 4___________________)   (__________________WD 5

Query      241 STGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWRIPTDPEAGGAGRVV 320 
WD40-rpts      __________________)(_____________________WD 6____________________)              

Query      321 NGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKVIKVWSPYKQPDSLGDLEGLVEDKSRSLYTHEEYISLVLNSGTGLSH 400 
WD40-rpts      (_________________WD 7________________)                                         

Query      401 DYVSQSVQEDPRMMAFFDSLVRREIEGWSSDSDSDLSEGAILQLHARARRSTRSTRSTPRSPAAVSAAHHSDSEHSSSSS 480 
WD40-rpts                           (_________________WD 8________________)   (________________

Query      481 LAGPDVSGSERTDQDRSGSQRNRARPRASAFLLDLVNEDSDSSGFWLDPMPRPRSPSPRENSSLSSHASSAGVASSSSSS 560 
WD40-rpts      _WD 9________________)                                                          

Query      561 PSSSSSSSSSTDGVDEELRRSRMRQRNAARWRRHIGFSPRDSAQTLHSATDSSNYPNISIHDQSSPSSSSGDEDRPFRNR 640 
WD40-rpts                                                                                      

Query      641 GKQKPSPSHLSDRQSQSRCRRRITSSFSGAGDGPLERAKSRAGFLAESGEELERGRTSGEELSTVEDLNLTLSSRTTVAG 720 
WD40-rpts                                                                                      

Query      721 VNGRPHIDENCGDSIHPECSGVELGKSAGDSRTQGEPSEREITSVAGKRTCSDSGDEDDSPSEKRAKTW 789 
WD40-rpts                                                                           

9 WD40-repeats found in QUERY=ENSDARP00000079302 (Len=789):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    41-80       8.02  446.04  6.1e-05       30.0%     45.78
  WD 2:  Seg  6    89-127      8.20  453.21  4.8e-05       22.5%     48.22
  WD 3:  Seg  9   128-169      7.15  410.01  0.00019       27.5%     55.65
  WD 4:  Seg 13   170-214      7.04  405.29  0.00021       27.5%     52.47
  WD 5:  Seg 17   218-259      5.97  361.47  0.00084       15.0%     50.64
  WD 6:  Seg 21   260-306      5.82  355.25  0.00101       22.5%     40.30
  WD 7:  Seg 25   321-359      8.29  457.05  4.3e-05       32.5%     50.00
  WD 8:  Seg 33   422-460      3.85  273.54  0.01275       10.0%     -5.75
  WD 9:  Seg 35   464-502      4.21  288.55  0.00802       12.5%      1.82

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   41-80     -SL----YK------KDMLGHF---GCVNAIEFSN-N-GGQWLVSGGDDRRVLLWH
   WD 2   89-127    -AK----PM------KLKGEHL---SNIFCLAFDS-T-N-KRVFSGGNDEQVILHD
   WD 3  128-169    VER---GET------LNVFLHD---DAVYGLSVSPVN-D-NVFASSSDDGRVLIWD
   WD 4  170-214    TREPPHGEP------FCLANYP---SAFHSVMFNPVE-P-RLLATANSKEGVGLWD
   WD 5  218-259    -PR----SS------LLRYGGSLSLQSAMSVRFNS-T-G-TQLLALRRRLPPVLYE
   WD 6  260-306    LHS----RLPSFQFDNQGYFNS---CTMKSCCFAG-DRD-QYILSGSDDFNLYMWR
   WD 7  321-359    -NG----AF------MVLKGHR---SIVNQVRFNP-H-T-YMICSSGVEKVIKVWS
   WD 8  422-460    -RR----EI------EGWSSDS---DSDLSEGAIL-Q-L-HARARRSTRSTRSTPR
   WD 9  464-502    -AV----SA------AHHSDSE---HSSSSSLAGP-D-V-SGSERTDQDRSGSQRN

   WD40 Template    TGE----CL------RTLSGHT---SGVTSVSFSP-D-G-KRLVSGSEDGTIKVWD