Input parameters:

  Query = ENSDARP00000079663 (Len=1386)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000079663, Len=1386):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGNQLAGIAPSQILSVDSYFSDIHDYEYDKSLGSTRFFKVARAKHREGLVVVKVFAIQDPSLPLTSYKQEVEELKIRLHS 80  
WD40-rpts                                                                                      

Query       81 CQNCLPFQKATLTEKAAILFRQYVRDNLYDRISTRPFLNNVEKKWIAFQLLNAVDQAHKSGVRHGDIKTENVMVTSWNWV 160 
WD40-rpts                                                                                      

Query      161 LLTDFASFKPTYLPEDNPADFNYFFDTSRRRTCYIAPERFVDGSMFATESDQTTPLVDLSSNSQRTRGELKQPMDIFSAG 240 
WD40-rpts                                                                                      

Query      241 CVIAELFTEGVPLFDLSQLLAYRKGHFQTEQVLMKIEDHSIRELVAQMVQREPEKRLTAEEYLKQQRGKAFPEIFYTFLQ 320 
WD40-rpts                                                                                      

Query      321 PYMAQFAKETFQSADERVLVIRKNLENILNNLCSGGQTAKAEKQEKASQEFSSSKEQGLVVLVSVITSCLQTLRFCDSKL 400 
WD40-rpts                                                                                      

Query      401 AALELILHLAGRLNVEILLDRITPYLLHFCNDSMPRVRAEAVRTLTKVLALVKEVPRNDVNIYPEYILPGIAHLAQDEAT 480 
WD40-rpts                                                                                      

Query      481 IVRLAYAENIAHLAETALRFLELVQENNLSSEHDLNGEDTEETLHPNENYDSELQALHEMVQQKVVTLLSDPENIVKQTL 560 
WD40-rpts                                                                                      

Query      561 MENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGAFFDSIVGVAAYVGWQSSSILKPLLQQGLSDVEEFVIYKAL 640 
WD40-rpts                                                                                      

Query      641 NALTCMCQLGLLQKPHIYEFVSDIAPFLCHPNLWIRYGAVGFITVVAQHLNIADVYCKLMPHLNPFITQPIIQIDKEIVL 720 
WD40-rpts                                                                                      

Query      721 LSVLKEPVSRSIFDYALRSKDIGSLFRHLLLRQKKRNGSIPECPIPEDPAIAQLLKKLLSQGMTEAEEDKLLALKDFMLK 800 
WD40-rpts                                                                                      

Query      801 SNKAKANIIDQSHLSEGAHSGVIDLGTLGITGRQVDLVKPKQEIEDKRARKHTKQDSNLNEEWKSMFGSLDPPSSASTPS 880 
WD40-rpts                                                                        (_____________

Query      881 TVPNVVVAGGGGGGGEPNGALAGERLRSESSSQTLNLPHVPSSAQSKIPDSGAAQPRKTTALPTIQVVQSITGASTYQRR 960 
WD40-rpts      ___________WD 1_______________________)                                (________

Query      961 ITTCKAELQQLVQQKREQCNAERMAKQMMESAEWESRPPLPGWHPKGLLVAHLHEHKSAVNRIRVSDEHSIFATCSNDGT 1040
WD40-rpts      ________________WD 2_______________________)        (______________WD 3_________

Query     1041 VKIWDSQKMEGKTTTTRSVLTYSRIGGHVKTLTFCQGSHYLAVASDNGSIQLLAVEANKPPKSPKVQPCQTRFLDPKEEG 1120
WD40-rpts      ____)          (_________________WD 4________________)   (______________________

Query     1121 CVVDVHHFNSGAQTVLAYATVNGFLVGWDLRSNSNAWTLRHDLRLGLITSFAVDMHQCWLCVGTSNGTMACWDMRFQLPI 1200
WD40-rpts      _WD 5_______________________)     (_________________WD 6________________)(______

Query     1201 SSHSHPARARIRRLLMHPLYQSSVIAAVQGNNEVSMWDMETGDRKFTLWASSAPPLSEMQPSPHSVHGIYCSPADGNPLL 1280
WD40-rpts      ______________WD 7___________________)              (__________________WD 8_____

Query     1281 LTAGSDMRIRFWDLAYPERSYIVAGGANDSLHCPSVFYNRKIIEGTEVVQEIHSKQKSGSTEDTPRRGPESLPVGHHDII 1360
WD40-rpts      ____________)                                                     (_____________

Query     1361 TDIATFQTTQGFIVTSSRDGIVKVWK 1386
WD40-rpts      ____WD 9_________________)

9 WD40-repeats found in QUERY=ENSDARP00000079663 (Len=1386):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 12   867-919      3.23  247.96  0.02800       22.5%     -1.07
  WD 2:  Seg 14   952-1004     3.07  241.32  0.03429       10.0%     14.28
  WD 3:  Seg 17  1013-1045     7.49  423.89  0.00012       30.0%     43.20
  WD 4:  Seg 20  1056-1094     6.53  384.48  0.00041       20.0%     49.39
  WD 5:  Seg 24  1098-1149     3.06  241.19  0.03443       12.5%     20.51
  WD 6:  Seg 28  1155-1193     5.65  347.92  0.00127       20.0%     44.80
  WD 7:  Seg 31  1194-1238     4.19  287.67  0.00824       12.5%     44.17
  WD 8:  Seg 35  1253-1293     5.54  343.49  0.00146       22.5%     37.47
  WD 9:  Seg 40  1347-1386     5.12  326.03  0.00251       27.5%     34.18

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  867-919    FGSLDPPSSASTPSTVPNVVVA---GGG-------------GGGGEPN-GAL--AG-------------ERLRSESSSQTLNLPH
   WD 2  952-1004   TGAS-------------TYQRR---ITTCKAELQQLVQQKREQCNAER-MAK--QM-------------MESAEWESRPPLPGWH
   WD 3 1013-1045   --------------------LH---EHK-------------SAVNRIR-VSD--EH-------------SIFATCSNDGTVKIWD
   WD 4 1056-1094   -TRS-------------VLTYS---RIG-------------GHVKTLT-FCQ--GS-------------HYLAVASDNGSIQLLA
   WD 5 1098-1149   -NKP-------------PKSPK---VQP-------------CQTRFLD-PKE--EGCVVDVHHFNSGAQTVLAYATVNGFLVGWD
   WD 6 1155-1193   -NAW-------------TLRHD---LRL-------------GLITSFA-VDM--HQ-------------CWLCVGTSNGTMACWD
   WD 7 1194-1238   MRFQ-------------LPISSHSHPAR-------------ARIRRLL-MHPLYQS-------------SVIAAVQGNNEVSMWD
   WD 8 1253-1293   -APP-------------LSEMQ---PSP-------------HSVHGIY-CSPADGN-------------PLLLTAGSDMRIRFWD
   WD 9 1347-1386   -RGP-------------ESLPV---GHH-------------DIITDIATFQT--TQ-------------GFIVTSSRDGIVKVWK

   WD40 Template    TGEC-------------LRTLS---GHT-------------SGVTSVS-FSP--DG-------------KRLVSGSEDGTIKVWD