Input parameters:

  Query = ENSDARP00000079959 (Len=713)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000079959, Len=713):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 QAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKFHKLKYGTELNQGDMKPPSYDSDDGNENEALPEPANSQLSWK 80  
WD40-rpts                                                                                      

Query       81 QGRQLLRQYLQEVGYTDTILDVKSQRVKALLGLCGETGGDARDEPMVNGTEPASLKDSTHTMIGNGKTQLINSRSLVECF 160 
WD40-rpts                                                                                      

Query      161 FKMIHSHTHTHTQKYTHRNTHMYTYTYAKMRAHTRIHKKCTRYTYTHACTHKDTLTHTHSHTHTHTHTHTHTHTHERVFS 240 
WD40-rpts                                 (______________WD 1_____________)                    

Query      241 PEHPKEEQSPLCESWDVDEGLISKLKEQYKKERKGKKGVKRPNRCKLQDMLANLRDAEDLSSIQPPVAPPARPSLPRLNE 320 
WD40-rpts                                                                                      

Query      321 HQLGRTDEVEAMTFPPSSGKSFIMGTDEALENELGLGELAGLTVANEAESLSYDITNNKDALRKTWNPKFTLRNHFDSIR 400 
WD40-rpts                                (__________________WD 2_________________)(____________

Query      401 GLAFHPVEPVLITASEDHTLKMWNLQKTAPTKKCAALDVEPIYTFRAHRGPVLCVVMSSSGEQCFSGGLDGTIQSWNTPN 480 
WD40-rpts      ____WD 3_______________)                  (_______________WD 4______________)   

Query      481 PNIDPYDSYESSVLRGSLSGHTDAVWGLVFSSAHQRLLSCSADGTVRLWSAADTEPAIACFNTNKELGVPSSVDVVCSDP 560 
WD40-rpts                 (_________________WD 5________________)(____________________WD 6_____

Query      561 AHMVTAFSNGRTGIYNMETRQLILELESQSAGKPDAPCQINKVLSHPTLPITITAQEDRHIRFFDNNTGKLIHSMVAHLD 640 
WD40-rpts      _______________)   (____________________WD 7____________________)   (___________

Query      641 AVTSLAVDPNGLYLMSGSHDCSVRLWNMESKTCIQEFTAHRKKFDESINDVAFHPSKCYIGSAGADALAKVFV 713 
WD40-rpts      ______WD 8________________)   (___________________WD 9__________________)

9 WD40-repeats found in QUERY=ENSDARP00000079959 (Len=713):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   188-220      4.44  298.21  0.00595        2.5%     11.74
  WD 2:  Seg  6   347-387      6.90  399.89  0.00025       17.5%     31.80
  WD 3:  Seg  9   388-424      8.87  481.26  2.0e-05       30.0%     45.50
  WD 4:  Seg 12   443-477      8.52  466.52  3.2e-05       32.5%     47.35
  WD 5:  Seg 15   492-530      9.27  497.48  1.2e-05       40.0%     51.36
  WD 6:  Seg 19   531-576      6.20  370.69  0.00063       12.5%     45.61
  WD 7:  Seg 23   580-625      6.82  396.21  0.00028       20.0%     57.78
  WD 8:  Seg 27   629-667     10.05  529.67  4.5e-06       32.5%     54.33
  WD 9:  Seg 31   671-713      6.97  402.74  0.00023       22.5%     49.53

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  188-220    -------------AK-MRA----HT-------RIHKKCTRYTYTHACTHKDTLTHTHS
   WD 2  347-387    DEA------LENELGLGEL----AG-------LTVANEAESLSYDITNNKDALRKTWN
   WD 3  388-424    ---------PKFTLR-NHF----DS-------IRGLAFHPVEPVLITASEDHTLKMWN
   WD 4  443-477    -----------YTFR-AHR----GP-------VLCVVMSSSGEQCFSGGLDGTIQSWN
   WD 5  492-530    -SV------LRGSLS-GHT----DA-------VWGLVFSSAHQRLLSCSADGTVRLWS
   WD 6  531-576    AADTEPAIACFNTNK-ELG----VP-------SSVDVVCSDPAHMVTAFSNGRTGIYN
   WD 7  580-625    -RQ------LILELE-SQS----AGKPDAPCQINKVLSHPTLPITITAQEDRHIRFFD
   WD 8  629-667    -GK------LIHSMV-AHL----DA-------VTSLAVDPNGLYLMSGSHDCSVRLWN
   WD 9  671-713    -KT------CIQEFT-AHRKKFDES-------INDVAFHPSKCYIGSAGADALAKVFV

   WD40 Template    TGE------CLRTLS-GHT----SG-------VTSVSFSPDGKRLVSGSEDGTIKVWD