Input parameters:

  Query = ENSDARP00000080947 (Len=760)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000080947, Len=760):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNQDLLSGGSGSRAAQQQRPRPGTAGAGNSISGRTPQPQPEHPDQVLEEPEQEEAQQQRREPAEEEDEGGPERQQDGDEQ 80  
WD40-rpts                                                                                      

Query       81 PWPSGGEPMEDGEGRRSEVNGDEKGAQWLWEQEQRRRRRPHREEEEENEEEEENNNSGREGQVGAGLRSEEDDDRPEEDN 160 
WD40-rpts                                                                                      

Query      161 EGEEEMDQDSDEFEHSEESEREEEEEDGEEEEGEEGLHSPSLRTSVSDHNDNTDQSSGRQRQSLRSPNRMKRKLDHGPEV 240 
WD40-rpts                                                                                      

Query      241 RSFTTGKKPCPSPTGQQYPATFGDLRAVNGQVPQRRRITSIQPPTGLQEWLRTFQSWSGPEKLLALDELIDSCEPTQVKH 320 
WD40-rpts                                                                                      

Query      321 MMQVIEPQFQRDFISLLPRELALHVLSFLEPKDLLQAAQTCRYWRILAEDNLLWKEKCKEEGIDEPLHIKRRKVIKPGFT 400 
WD40-rpts                                                                (__________________WD 

Query      401 HSPWKSAYIRQHRIDTNWRRGDLKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 480 
WD40-rpts      1_________________)   (________________WD 2________________)   (________________

Query      481 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 560 
WD40-rpts      WD 3_______________)   (________________WD 4_______________)   (________________

Query      561 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 640 
WD40-rpts      WD 5_______________)   (________________WD 6_______________)   (________________

Query      641 ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNLVTLESGG 720 
WD40-rpts      WD 7_______________)   (_________________WD 8_________________)   (_____________

Query      721 SGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK 760 
WD40-rpts      ________WD 9_____________________)      

9 WD40-repeats found in QUERY=ENSDARP00000080947 (Len=760):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   379-419      4.41  296.86  0.00620       12.5%     17.37
  WD 2:  Seg  3   423-460      7.29  415.96  0.00015       37.5%     44.12
  WD 3:  Seg  7   464-500      9.11  490.78  1.5e-05       50.0%     52.56
  WD 4:  Seg 11   504-540      9.06  488.82  1.6e-05       52.5%     50.48
  WD 5:  Seg 15   544-580      9.11  490.86  1.5e-05       47.5%     51.00
  WD 6:  Seg 19   584-620      8.94  483.93  1.9e-05       52.5%     52.34
  WD 7:  Seg 23   624-660      8.63  471.24  2.8e-05       40.0%     52.42
  WD 8:  Seg 27   664-703      7.95  442.87  6.7e-05       35.0%     50.44
  WD 9:  Seg 31   707-754      5.23  330.70  0.00217       32.5%     53.39

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  379-419    KEEGIDEPL-----HIKRRKVIKP-GFTHSPWKSAYIRQHRI----DTNWR
   WD 2  423-460    -LKSP-KVL-----KGHDDHVITC--LQFCGNRIVSGSDDNT----LKVWS
   WD 3  464-500    -GKCL-RTL-----VGHTGGVWSS-QMRDN--IIISGSTDRT----LKVWN
   WD 4  504-540    -GECI-HTL-----YGHTSTVRCM-HLHE--KRVVSGSRDAT----LRVWD
   WD 5  544-580    -GQCL-HVL-----MGHVAAVRCV-QY--DGRRVVSGAYDFM----VKVWD
   WD 6  584-620    -ETCL-HTL-----QGHTNRVYSL-QF--DGIHVVSGSLDTS----IRVWD
   WD 7  624-660    -GNCI-HTL-----TGHQSLTSGM-ELKDN--ILVSGNADST----VKIWD
   WD 8  664-703    -GQCL-QTL-----QGPHKHQSAVTCLQFNKNFVITSSDDGT----VKLWD
   WD 9  707-754    -GEFI-RNLVTLESGGSGGVVWRI-RASNTKLVCAVGSRNGTEETKLLVLD

   WD40 Template    TGECL-RTL-----SGHTSGVTSV-SFSPDGKRLVSGSEDGT----IKVWD