Input parameters:

  Query = ENSDARP00000083772 (Len=443)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000083772, Len=443):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGWQSRTRTLQVFDTELTADTVEWCPIPQWAHVLACGTYQQLLEGDDKQRTEGSAAPSRIGRLYLFDCNPQSSFIPPLTE 80  
WD40-rpts                                (_______________________WD 1______________________)   

Query       81 SQRIDTAAILDLKWCHVPISERPLLGMATASGEIQLYKLIEAQQGSSGLECELSTDLGPDRLALSLDWSTGRGESSDVRV 160 
WD40-rpts          (______________WD 2______________)               (_________________WD 3_____

Query      161 VSSDSTGSLTLLSLGEADLTAVCQWKAHEYEAWISAFSYWDTQTVYSGGDDSKLKGWDLRMGCSSPTFTSKRHTMGVCSI 240 
WD40-rpts      ____________)(____________________WD 4___________________)     (________________

Query      241 HSNPHREHILATGSYDENVLLWDGRNMKQPLSETAVGGGVWRLKWHPSQEHLLLAACMHNDFQILYCQKALEGQETPCPV 320 
WD40-rpts      _WD 5_________________)   (_________________WD 6_________________)(_____________

Query      321 LGSYILHNSLAYGADWSRLPVSSSAPPSPQEPPQTSSGLVESTGHLRIQYESPTASFDTSLEDDSGRYIPDQCPSPEKSS 400 
WD40-rpts      _______WD 7____________________)          (________________________________WD 8_

Query      401 VSDLFTSDARDSVSCLIATCSFYDHMMHVWRWDWSPEEKHESL 443 
WD40-rpts      ______________________________)            

8 WD40-repeats found in QUERY=ENSDARP00000083772 (Len=443):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    27-77       4.03  280.97  0.01014       10.0%      0.10
  WD 2:  Seg  6    85-118      5.25  331.52  0.00212        7.5%     32.43
  WD 3:  Seg  9   134-173      5.56  344.47  0.00142       20.0%     46.66
  WD 4:  Seg 12   174-218      7.22  412.96  0.00017       30.0%     52.75
  WD 5:  Seg 16   224-263      6.90  399.50  0.00026       32.5%     51.89
  WD 6:  Seg 20   267-306      6.04  364.01  0.00077       10.0%     49.26
  WD 7:  Seg 24   307-352      5.97  361.30  0.00084       17.5%      3.15
  WD 8:  Seg 27   363-431      4.75  310.99  0.00400       22.5%     32.35

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   27-77     IPQ----W----------------------------AH------VLACGTYQQLLEGDDKQRTEGSAAPSR-----IGRL-YLFDC-NPQSSFIPP
   WD 2   85-118    --------------------------------------------DTA-----------AILDLKWCHVPIS-----ERPL-LGMAT-ASGEIQLYK
   WD 3  134-173    -------------------------------------S------TDL-----------GPDRLALSLDWSTGRGESSDVR-VVSSD-STGSLTLLS
   WD 4  174-218    LGEADLTA----------------------------VC------QWK-----------AHEYEAWISAFSY----WDTQT-VYSGG-DDSKLKGWD
   WD 5  224-263    -SS----P----------------------------TF------TSK-----------RHTMGVCSIHSNP----HREHI-LATGS-YDENVLLWD
   WD 6  267-306    -MK----Q----------------------------PL------SET-----------AVGGGVWRLKWHP-----SQEHLLLAAC-MHNDFQILY
   WD 7  307-352    CQK----A----------------------------LEGQETPCPVL-----------GSYILHNSLAYGA-----DWSR-LPVSS-SAPPSPQEP
   WD 8  363-431    TGH----LRIQYESPTASFDTSLEDDSGRYIPDQCPSP------EKS-----------SVSDLFTSDARDS-----VSCL-IATCSFYDHMMHVWR

   WD40 Template    TGE----C----------------------------LR------TLS-----------GHTSGVTSVSFSP-----DGKR-LVSGS-EDGTIKVWD