Input parameters:

  Query = ENSDARP00000087525 (Len=470)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000087525, Len=470):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 VCGLQMSWSSAYRSSKFRHVYGKAGSREQCYEGIPITHSVHDNQFCAVNPKFLAVVTESAGGGAFIVIPLHKVSLTSGKD 80  
WD40-rpts                                                                                      

Query       81 SLTSGGHQGSVMDIKWSPFMDNIIASSSEDCTVRIWQIPDNGLRRNLTEALMILIGHSRRVGLIEWHPTCSGILFSAGYD 160 
WD40-rpts        (_______________WD 1______________)          (_________________WD 2___________

Query      161 CKILMWNLEEGVAVKMIDSHPDVVLCMSFNTDGSLLATSCKDKKLRIIDPRSGKVLQESCCKSLRVNRVVFLGNLRRVFT 240 
WD40-rpts      ______)   (_________________WD 3________________)   (___________________WD 4____

Query      241 TGVSRWNSRQIALWDQDDLSCPLLEEEIDGLAGALFPYYDSHHQGDGNIRYYEVGAEKPFLQFLTEFRSAAPQKSLCEFQ 320 
WD40-rpts      ______________)(________________WD 5________________)                           

Query      321 PKRGVDVSECEIFRFYKLVTFRGLVEPVSMIVPRRVSQTYIFPMTAGAESALSAAEWLSGIDRGVFSLKEAYKRPNPVSL 400 
WD40-rpts                                                                                      

Query      401 RASRRDRRMIKGIDLLFQNIVILVTAQLLTTVYRQQEELRKLKEELREKEERIQTLELELNNLRESKKHS 470 
WD40-rpts                                                                            

5 WD40-repeats found in QUERY=ENSDARP00000087525 (Len=470):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    83-117      7.00  403.85  0.00022       30.0%     47.25
  WD 2:  Seg  7   128-167      6.54  384.82  0.00041       30.0%     51.92
  WD 3:  Seg 11   171-209      8.59  469.34  2.9e-05       25.0%     54.29
  WD 4:  Seg 15   213-255      5.20  329.59  0.00225       27.5%     47.44
  WD 5:  Seg 19   256-293      3.36  253.38  0.02371       15.0%     23.00

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   83-117    -------TSGGHQGSVMDIKWSPFMDN-II----ASSSEDCTVRIWQ
   WD 2  128-167    -TEA-LMILIGHSRRVGLIEWHP-TCSGIL----FSAGYDCKILMWN
   WD 3  171-209    -GVA-VKMIDSHPDVVLCMSFNT-DGS-LL----ATSCKDKKLRIID
   WD 4  213-255    -GKV-LQESCCKSLRVNRVVFLG-NLR-RVFTTGVSRWNSRQIALWD
   WD 5  256-293    QDDLSCPLLEEEIDGLAGALFPY-YD--------SHHQGDGNIRYYE

   WD40 Template    TGEC-LRTLSGHTSGVTSVSFSP-DGK-RL----VSGSEDGTIKVWD