Input parameters:

  Query = ENSDARP00000089117 (Len=513)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000089117, Len=513):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSIEIESADVIRLIMQYLKENSLHRTLAMLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLIDLYEQV 80  
WD40-rpts      (________________________________________WD 1___________________________________

Query       81 VLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENLLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSR 160 
WD40-rpts      _____)                                                               (__________

Query      161 LMALLGQSLKWQQHQGLLPPGMTIDLFRGKAAVKDVEEERFPTQLARHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240 
WD40-rpts      ___________WD 2_____________________)      (_________________WD 3_______________

Query      241 WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDST 320 
WD40-rpts      _)           (_________________WD 4________________)   (_________________WD 5___

Query      321 QILSASFDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPDGHHAISASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITV 400 
WD40-rpts      ______________)   (_________________WD 6________________)           (___________

Query      401 NNVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL 480 
WD40-rpts      _____WD 7________________)     (_________________WD 8________________)   (______

Query      481 TVHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP 513 
WD40-rpts      ___________WD 9________________) 

9 WD40-repeats found in QUERY=ENSDARP00000089117 (Len=513):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-86       5.13  326.47  0.00248       15.0%     21.43
  WD 2:  Seg  5   150-197      7.45  422.61  0.00013       12.5%     42.41
  WD 3:  Seg  9   204-242      9.60  511.41  8.0e-06       42.5%     46.41
  WD 4:  Seg 13   254-292      8.66  472.21  2.7e-05       32.5%     48.02
  WD 5:  Seg 16   296-335      9.03  487.75  1.7e-05       42.5%     53.84
  WD 6:  Seg 20   339-377     10.89  564.35  1.5e-06       45.0%     56.46
  WD 7:  Seg 25   389-426      6.20  370.86  0.00063       20.0%     41.85
  WD 8:  Seg 28   432-470      7.07  406.52  0.00021       12.5%     48.10
  WD 9:  Seg 32   474-512      9.66  513.50  7.5e-06       32.5%     52.46

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-86     MSIEIESADVIRLIMQYLKENSLHRTLAMLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKL-PDKTLIDLYEQVVLELIE
   WD 2  150-197    AGEVSVV-------------PP-----SRLMALLGQSLKWQQH----------QG----------LLP-PGMTIDLFRGKAAVKDVE
   WD 3  204-242    -QLARHI-------------KF-------------GQKSHVEC----------AR----------FSP-DGQYLVTGSVDGFIEVWN
   WD 4  254-292    -YQAQDN-------------FM-------------MMDDAVLC----------MS----------FSR-DTEMLATGAQDGKIKVWK
   WD 5  296-335    -GQCLRR-------------YE------------RAHSKGVTC----------LS----------FSK-DSTQILSASFDQTIRIHG
   WD 6  339-377    -GKCLKE-------------FR-------------GHSSFVNE----------AT----------LTP-DGHHAISASSDGTVKVWN
   WD 7  389-426    ---SLGT-------------SA-------------GTDITVNN----------VI----------LLPKNPEHFVVCNRSNTVVIMN
   WD 8  432-470    -VRSFSS-------------GK-------------REGGDFVC----------CT----------LSP-RGEWIYCVGEDFVLYCFS
   WD 9  474-512    -GKLERT-------------LT-------------VHEKDVIG----------IA----------HHP-HQNLIGTYSEDGLLKLWK

   WD40 Template    TGECLRT-------------LS-------------GHTSGVTS----------VS----------FSP-DGKRLVSGSEDGTIKVWD