Input parameters:

  Query = ENSDARP00000089501 (Len=1158)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000089501, Len=1158):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MHISAFVSHSLENNMKKFNIRKVLDGLTAASSSSSSAAAASPQSGNDMIQETLQSEHFQLCKTVRHGFPYQPSSMAFDPV 80  
WD40-rpts                                                        (_____________________WD 1____

Query       81 QKILAIGTQSGALRLFGRAGVECYCQHESGSAVIQLEFLVNVGALVSALADDSIHLWNLRQKLPAVLHSLKFNRERITFC 160 
WD40-rpts      ________________)  (_________________WD 2________________)     (________________

Query      161 HLPFQSKWLYVGTERGNIHIVNVESFTLSGYVIMWNKAIELSSKTHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSK 240 
WD40-rpts      _WD 3________________)                  (_______________WD 4_______________)  (_

Query      241 KADYRYNYDEAIHSVAWHHEGKQFVCSHSDGTLTTWNVRAPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYKTTRAGDP 320 
WD40-rpts      ________________WD 5________________)                                           

Query      321 FMILCGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYAVVVLLEKDLVVIDLAQIGYPIFEN 400 
WD40-rpts                                                                                      

Query      401 PYPLSIHESPVTCCEYFADCPAEAIPALYSVGSRQKRQGFSKKEWPISAGNWGQGTLSFSEIIITGHADGSIKFWDASAL 480 
WD40-rpts                                    (____________________WD 6____________________)    

Query      481 MLQVLYKLKTAKVFDKPRSKEEKSSTDIVDEDPFAIQMLSWCPESRVLCVAGVSAHVIVYRFSKQEVTTEVVQLLEVRMQ 560 
WD40-rpts                            (_________________WD 7________________)       (___________

Query      561 CELNEVESPEGGGDQASAVSTPGTAPSPQTSLPQSHPSTSSNNSCDGLRDNVPCLKVRSSPLKQFPGYHVELLIQLVWVS 640 
WD40-rpts      ______WD 8________________)                                                   (_

Query      641 GEPPQQITSLAINSAYGLVAFGNGNGLAVVDYIQKTLLLNVTTAELYGSTDPHHRQPRSPRKTRQPSAGLCDGNDASAAP 720 
WD40-rpts      _____________WD 9_____________)                                                 

Query      721 EERCKSPTSGSGSPCNSDEDSKQKFIERVKTKSKRISKTVANDFAKISRKINMLADQKDDARDNSFSRSRSSSVTSIDRE 800 
WD40-rpts                                                                                      

Query      801 SREVISSFYFCDSLSKKSETLAVPSLWVGTSLGSMLAIALTVPSTPEQRMQQPVGVSFCGSVVRLKGAILRMAQLDASGT 880 
WD40-rpts                                                                                      

Query      881 VLPHIYEPWYEPNAPEEERERPRRRRPTSPPSSQENQDCQYAVVCSEKQAKVVALPSQHCIFEHNITEASFVLRADVVTM 960 
WD40-rpts                                                                                      

Query      961 TAGVAIACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFSNQGQALYLTSPTEIQRITYSQETCENLQEMLGEM 1040
WD40-rpts                                                                                      

Query     1041 FTLVETPEAPNRGFFKGLFGGGAQSLDREDLFGEVAAGKASRSLAQHIPGPGGMEGMKGAASGVVGELARARIALDERGQ 1120
WD40-rpts                                                                                      

Query     1121 KLGELEERTAAMMASADSFSKHAHDMMLKYKDKKWYQL 1158
WD40-rpts                                            

9 WD40-repeats found in QUERY=ENSDARP00000089501 (Len=1158):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    51-97       5.72  351.03  0.00116       22.5%     45.36
  WD 2:  Seg  7   100-138      6.62  388.00  0.00037       25.0%     57.13
  WD 3:  Seg 11   144-182      6.23  371.92  0.00060       22.5%     54.64
  WD 4:  Seg 16   201-236      5.30  333.72  0.00198       27.5%     45.27
  WD 5:  Seg 19   239-277      6.73  392.63  0.00032       22.5%     55.20
  WD 6:  Seg 31   431-476      6.27  373.54  0.00058       22.5%     25.80
  WD 7:  Seg 35   503-541      4.24  289.97  0.00768       10.0%     46.27
  WD 8:  Seg 38   549-587      3.52  260.19  0.01923       12.5%     -2.55
  WD 9:  Seg 40   639-671      2.93  235.64  0.04078       15.0%     38.83

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   51-97     ETLQSEHFQL------CKTVRHGFPYQPSSMAFDP-VQKILAIGTQSGALRLFG
   WD 2  100-138    -G-------V------ECYCQHESGSAVIQLEFLV-NVGALVSALADDSIHLWN
   WD 3  144-182    -P-------A------VLHSLKFNRERITFCHLPF-QSKWLYVGTERGNIHIVN
   WD 4  201-236    ------------------LSSKTHPGPVVHISDNPMDEGKLLIGFECGIVVLWD
   WD 5  239-277    -S-------K------KADYRYNYDEAIHSVAWHH-EGKQFVCSHSDGTLTTWN
   WD 6  431-476    VG-------SRQKRQGFSKKEWPISAGNWGQGTLS-FSEIIITGHADGSIKFWD
   WD 7  503-541    -K-------S------STDIVDEDPFAIQMLSWCP-ESRVLCVAGVSAHVIVYR
   WD 8  549-587    -T-------E------VVQLLEVRMQCELNEVESP-EGGGDQASAVSTPGTAPS
   WD 9  639-671    -------------------VSGEPPQQITSLAINS-AYGLVAFGNGNG-LAVVD

   WD40 Template    TG-------E------CLRTLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD