Input parameters:

  Query = ENSDARP00000091436 (Len=1203)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000091436, Len=1203):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFIYLSKKIAIPNNTVLKCVSWNKDQGFIACGGEDGLLKVLKLETYTDDAKLKGLAAPSNLSMNQTLEGHSGAVQVVTWN 80  
WD40-rpts        (_________________WD 1_________________)                  (_________________WD

Query       81 EQYQKLTTSDQNGLIIVWMLYKGSWYEEMINNRNKSVVRSMSWNADGLKICIVYEDGAVIVGSVDGNRIWGKELKGTQLA 160 
WD40-rpts       2________________)(___________________WD 3___________________)  (______________

Query      161 HVAWSPDSKILLFGMANGEIHIYDNQGNFIMKMSMSCLANVTGALSIAGIHWYPGTEGYLEPECPCLAVCFTNGHCQVMR 240 
WD40-rpts      ___WD 4________________)                                                        

Query      241 HESDDSPVIIETGMWNVASIQWNHCGSVLAIAGSLRNSGAEKEMNVVHFYTPFGEHLRTLKVPGKQMTAVSWEGGGLRIG 320 
WD40-rpts         (_________________WD 5________________)           (________________WD 6______

Query      321 LAVDSYIYFANIRPDYKWGYCSNTVVYAYTRPDRLEYSVVFWDTKNNERFVKYVKSLMSITTCGDFCILATKADDTHPQE 400 
WD40-rpts      __________)                                (_________________WD 7_______________

Query      401 DTEAEAGSAMAFNELSNQNTSKDRSKRRKYVLVLCNSIGTPQDSKYIDIDPLFVTMTKTHVIAASREAFYIWQYRVAKKL 480 
WD40-rpts      _)                                                                              

Query      481 TALEINQVTKTRKEGRERVYHIDDSPSGTSDGTLNFAKAFTATRDPICCITASDKMLLVGRESGILQRYSLPNISLLQKY 560 
WD40-rpts                                    (_________________WD 8_________________)(_________

Query      561 SLTSRPYQLSLNCNSSRLAIIDITGVLTFLDVETRGSMGDAEGGSTAGDPSKFERKDVWDMKWANDNPDLFSMMEKTRMY 640 
WD40-rpts      _________WD 9_________________)                                                 

Query      641 VFRNLDPEEPIQTSGFICHFEDLEIKSVLLDEIMRDPDVPNKDYLMNFEIRSLRDSRALIEKVGIEDASQFIEDNPHPRL 720 
WD40-rpts                                                                                      

Query      721 WRLLAEAALQKLDLKMAEQAFVRCRDYQGIEFVKRLSNLQSEAMKQAEVAAYFSRFEEAERMYLDMDRRDLAISLRIKLG 800 
WD40-rpts                                                                                      

Query      801 DWFRVLQLLKTGSGDSDDALLEQAYNAIGDYFADRQKWLNAVQYYLQGRNQERLAECYYMLEDYDGLERLANSLPENHKL 880 
WD40-rpts                                                                                      

Query      881 LPDIGQMFVTVGMCEQAVSAFLKCNQPKAAVDACVHLNQWNKAVELAKNHSMKEIGPLLSKYASHLLEKNKTLEAVELYR 960 
WD40-rpts                                                                                      

Query      961 KAHHFLDAAKLMYKIAEEEAKKRTRPLRVKKLYVLAALLVEDFHTQIKSSQQSKTKGKKSEATSALAGLLEEDESSSDSR 1040
WD40-rpts                                                                                      

Query     1041 ILDDAWRGAEAYHFFLLAQRQLYDGKVDAAMRTALHLRDYEDIIPAVEIYSLLAICSSANGAFGTCSRAFIKLESLETLT 1120
WD40-rpts                                                                                      

Query     1121 PDQRQLYEDLALEIFTKHSPRDTRQSQRDSLTEGPEGKLPTCIVTGRVISEYQFWMCSVCKHCALEQEITQQNFCPLCHS 1200
WD40-rpts                                                                                      

Query     1201 TVG 1203
WD40-rpts         

9 WD40-repeats found in QUERY=ENSDARP00000091436 (Len=1203):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     3-42       7.22  412.72  0.00017       22.5%     46.91
  WD 2:  Seg  4    61-99       6.76  393.76  0.00031       27.5%     47.11
  WD 3:  Seg  7   100-143      5.36  336.02  0.00184       25.0%     52.85
  WD 4:  Seg 11   146-184      6.39  378.81  0.00049       27.5%     56.16
  WD 5:  Seg 20   244-282      4.23  289.43  0.00780       10.0%     36.65
  WD 6:  Seg 24   294-331      5.24  331.25  0.00214       32.5%     53.39
  WD 7:  Seg 30   364-402      3.09  242.43  0.03315       15.0%     29.97
  WD 8:  Seg 41   511-550      2.98  237.82  0.03815       15.0%     35.37
  WD 9:  Seg 44   551-591      4.11  284.47  0.00910       20.0%     46.79

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    3-42     IYL-SK----KIAIPNNTVLKCVSWNKDQGFIACGGEDGLLKVLK
   WD 2   61-99     -LS-MN----QTLEGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWM
   WD 3  100-143    LYK-GSWYEEMINNRNKSVVRSMSWNADGLKICIVYEDGAVIVGS
   WD 4  146-184    -GN-RI----WGKELKGTQLAHVAWSPDSKILLFGMANGEIHIYD
   WD 5  244-282    -DD-SP----VIIETGMWNVASIQWNHCGSVLAIAGSLRNSGAEK
   WD 6  294-331    -GE-HL----RTLKVPGKQMTAVSWEGGGLRIGLAV-DSYIYFAN
   WD 7  364-402    TKN-NE----R-FVKYVKSLMSITTCGDFCILATKADDTHPQEDT
   WD 8  511-550    DGT-LN----FAKAFTATRDPICCITASDKMLLVGRESGILQRYS
   WD 9  551-591    LPNISL----LQKYSLTSRPYQLSLNCNSSRLAIIDITGVLTFLD

   WD40 Template    TGE-CL----RTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD