Input parameters:

  Query = ENSDARP00000092903 (Len=292)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000092903, Len=292):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDNPNPDDNPDPELEDTLQLHEDEEIELEDTPQSPDALADELEDVCVADDDDDDGWQTEDELMESEQDDSELTFTRHTGS 80  
WD40-rpts                                  (_________________WD 1________________)(____________

Query       81 VFCVRLDPLTNSLAMSGGEDDRAFLWRVCDGEVLLECTGHKDSVVCVGFSSDSALAASGDMSGVIRVWSVEKREEVWSAE 160 
WD40-rpts      _____WD 2_________________)   (_________________WD 3________________)(__________

Query      161 VGDLEWLEWHPCAPVLLAGVADGSVWMWKLPSGACRTFQSPGCQTTCGRILPDGKRAIVGYEDGSLRLWDLKQGTAIYVI 240 
WD40-rpts      _______WD 4_________________)  (_________________WD 5________________)(_________

Query      241 KGQDGHRGALTCVSSNQEGALLLSGSVDGQAKLISSSSGKRGVCSRHGRRRP 292 
WD40-rpts      ___________WD 6___________________)                 

6 WD40-repeats found in QUERY=ENSDARP00000092903 (Len=292):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    29-67       5.87  356.96  0.00096       10.0%     13.93
  WD 2:  Seg  5    68-107      8.22  454.31  4.7e-05       30.0%     53.50
  WD 3:  Seg  9   111-149     10.32  540.99  3.2e-06       40.0%     54.70
  WD 4:  Seg 13   150-189      9.66  513.72  7.4e-06       17.5%     52.02
  WD 5:  Seg 17   192-230      9.68  514.51  7.2e-06       35.0%     54.22
  WD 6:  Seg 21   231-275      8.78  477.53  2.3e-05       32.5%     49.24

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   29-67     -ED-----TPQSPDALADELEDVCVADDDDDD-GWQTEDELMESEQ
   WD 2   68-107    -DD-----SELTFTRHTGSVFCVRLDPLTNSLAMSGGEDDRAFLWR
   WD 3  111-149    -GE-----VLLECTGHKDSVVCVGFSSDSALA-ASGDMSGVIRVWS
   WD 4  150-189    VEK-----REEVWSAEVGDLEWLEWHPCAPVL-LAGVADGSVWMWK
   WD 5  192-230    -SG-----ACRTFQSPGCQTTCGRILPDGKRA-IVGYEDGSLRLWD
   WD 6  231-275    LKQGTAIYVIKGQDGHRGALTCVSSNQEGALL-LSGSVDGQAKLIS

   WD40 Template    TGE-----CLRTLSGHTSGVTSVSFSPDGKRL-VSGSEDGTIKVWD