Input parameters:

  Query = ENSDARP00000093076 (Len=528)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000093076, Len=528):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTWRPQYRSSKYRHVFGKPATKENCYDGVPITRSVHDNQLCAANPRFIAVITECAGGGSFLVLPVHHTGKVDPHHPKVSG 80  
WD40-rpts                                                                             (________

Query       81 HRGNVLDIKWNHFNDFCIASCSEDATVKIWEIPEHGVLKTITVPWKELQGHSRRVGLIEWHPTANNIIFSTGYDYQVMVW 160 
WD40-rpts      _________WD 1_________________)              (_______________WD 2_______________

Query      161 KLDVPEQVIKNPVRSISVHSDVVLSMSFNTDGSKLATSCKDKKIRVIDPRTGTILQETNCKSHKASKVLFLGNLKMLLST 240 
WD40-rpts      )            (_______________WD 3______________)   (___________________WD 4_____

Query      241 GNSRWNHRQIALWDQEDLSQPSYSEDLDGSSGVLFPFYDPDTHMLYIAGKGDGNIRYYEISPEKPYVHYLTEYRSHLPQK 320 
WD40-rpts      _____________)(____________________WD 5___________________) (__________________W

Query      321 GMGVMPKRGLDVCSCEIFRFYKLVTIKSLIEPLSMIVPRRSESYQEDIYPMTAGNKPAMTANEWISGLDKGPVMMSLRPG 400 
WD40-rpts      D 6__________________)                                                          

Query      401 SKVDTYVELGLKKSPMESTEMHNSRSQPGLSQLIQRLETKDGNGRKESHPTLLLPSTEENGSSASHVSNGQLDSPHCSPP 480 
WD40-rpts                                                                                      

Query      481 KTENELRQMFYKQQEEIRKMRELLNQKDVRIKQLELEIKNVRNSQAPL 528 
WD40-rpts                                                      

6 WD40-repeats found in QUERY=ENSDARP00000093076 (Len=528):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6    72-111      7.04  405.42  0.00021       27.5%     44.60
  WD 2:  Seg 11   126-161      6.22  371.52  0.00061       22.5%     47.74
  WD 3:  Seg 14   174-208      8.25  455.35  4.5e-05       35.0%     48.96
  WD 4:  Seg 17   212-254      5.55  343.76  0.00145       25.0%     48.78
  WD 5:  Seg 21   255-299      4.31  292.70  0.00705       25.0%     35.67
  WD 6:  Seg 25   301-342      4.50  300.48  0.00554       12.5%     35.08

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   72-111    -DP--HHPKVSGH----RGNVLDIKWNHFNDFC-I-ASCS----EDATVKIWE
   WD 2  126-161    -------KELQGH----SRRVGLIEWHP-TANNII-FSTG----YDYQVMVWK
   WD 3  174-208    -------RSISVH----SDVVLSMSFNT-DGSK-L-ATSC----KDKKIRVID
   WD 4  212-254    -GT--ILQETNCK----SHKASKVLFLG-NLKM-L-LSTGNSRWNHRQIALWD
   WD 5  255-299    QED--LSQPSYSEDLDGSSGVLFPFYDP-DTHM-LYIAGK----GDGNIRYYE
   WD 6  301-342    SPEKPYVHYLTEY----RSHLPQKGMGV-MPKR-G-LDVC----SCEIFRFYK

   WD40 Template    TGE--CLRTLSGH----TSGVTSVSFSP-DGKR-L-VSGS----EDGTIKVWD