Input parameters:

  Query = ENSDARP00000093316 (Len=304)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000093316, Len=304):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MMKFRFRRQGNDPHREKIKQDLFAFNKTVEHGFPNQPSALAYDPKLQLMAIGTKSGAIKIYGAPGVEMTGLHKDTAAVTQ 80  
WD40-rpts                             (_________________WD 1________________)  (_______________

Query       81 IHFLCGQGRILSLLDDNTIHLWEIVQRENRSHLLEVHSFNLPGRPGIESTSATRVTVMLLNLSCNLLALGTEGGGVHFLE 160 
WD40-rpts      __WD 2________________)_______________WD 3________________)                     

Query      161 LPTLTLLNKSLFQDEIMQSVPEEYKCGKSLGPVESLQEHPKDSDKILIGYSRGLVVLWDLSSRHVDNLFLGKQLESLVWE 240 
WD40-rpts                            (________________WD 4_______________)(_________________WD 

Query      241 RSGNSFVSSHSDGGYMVWAVSSSNPCTHDPVSSTIPYGPFPCKAVNKILWRTTESGFVLLMCEK 304 
WD40-rpts      5_________________)                                             

5 WD40-repeats found in QUERY=ENSDARP00000093316 (Len=304):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    24-62       7.45  422.24  0.00013       15.0%     44.74
  WD 2:  Seg  6    65-103      7.94  442.65  6.7e-05       30.0%     59.68
  WD 3:  Seg  9   101-139      4.54  302.37  0.00523       10.0%     21.64
  WD 4:  Seg 15   183-219      6.30  375.02  0.00055       20.0%     48.74
  WD 5:  Seg 18   220-259      7.21  412.29  0.00017       20.0%     53.00

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   24-62     -AFNKTVEHGFPNQPSALAYDP-KLQLMAIGTKSGAIKIYG
   WD 2   65-103    -GVEMTGLHKDTAAVTQIHFLC-GQGRILSLLDDNTIHLWE
   WD 3  101-139    -LWEIVQRENRSHLLEVHSFNL-PGRPGIESTSATRVTVML
   WD 4  183-219    ----EYKCGKSLGPVESLQEHPKDSDKILIGYSRGLVVLWD
   WD 5  220-259    LSSRHVDNLFLGKQLESLVWER-SGNSFVSSHSDGGYMVWA

   WD40 Template    TGECLRTLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD