Input parameters:

  Query = ENSDARP00000099166 (Len=494)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000099166, Len=494):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPVESGNSAAARQVKQKRKSHSLSIRRTNSTEQDRTGMQRDMLEGQDSKLPMALRSNLLDLFGQIEREFENLYIENLELR 80  
WD40-rpts                                                                                      

Query       81 REIESLNERLSGEGQTVEGGDLSKGALKTKASHSTSQLSQKLKTTYKASTSKIVSSFKATTSRAVCQLVKEYVGHRDGIW 160 
WD40-rpts                           (________________WD 1_______________)        (_____________

Query      161 DLAVTRVQPLVLGTASADHCSMLWSIETGKCLLKYAGHAGSVNSIKFHPTEQMALTASGDQTAHIWRYMVQLPLPQPPAD 240 
WD40-rpts      ____WD 2________________)   (_________________WD 3________________)   (_________

Query      241 ISASLDDDVDFSDKDEADGDADGPNECPTIRVATTTLKSHQGVVIAADWLVGGKQVVTASWDRAANLYDVETSELVHTLT 320 
WD40-rpts      ________WD 4________________)(_________________WD 5_________________)   (_______

Query      321 GHDQELTHCCTHPTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNVVSGSDDRTVKVWDLKNMRS 400 
WD40-rpts      __________WD 6________________)     (________________WD 7________________)   (__

Query      401 PIATIRTDSAVNRISVSANQRIIALPHDNRQVRLFDMNGVRLARLPRSNRQGHRRMVCCSAWNEENQACNLFTCGFDRQA 480 
WD40-rpts      _______________WD 8________________)(_____________________WD 9__________________

Query      481 IGWNINIPALLQEK 494 
WD40-rpts      ___)          

9 WD40-repeats found in QUERY=ENSDARP00000099166 (Len=494):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   102-138      5.30  333.53  0.00199       15.0%     41.34
  WD 2:  Seg  6   147-185      7.27  414.97  0.00016       17.5%     48.65
  WD 3:  Seg 10   189-227      9.96  526.00  5.1e-06       32.5%     56.78
  WD 4:  Seg 14   231-269      7.48  423.80  0.00012       15.0%     39.48
  WD 5:  Seg 17   270-309      9.93  524.86  5.2e-06       25.0%     49.76
  WD 6:  Seg 21   313-351      9.78  518.46  6.4e-06       32.5%     55.87
  WD 7:  Seg 25   357-394      8.37  460.41  3.9e-05       45.0%     51.10
  WD 8:  Seg 29   398-436      8.13  450.49  5.3e-05       12.5%     49.50
  WD 9:  Seg 33   437-484      6.26  373.41  0.00058       15.0%     40.74

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  102-138    LSK-----GALKTKASH----STSQLSQ-KLK--TTYKASTSKIVSSFK
   WD 2  147-185    --Q------LVKEYVGHRDGIWDLAVTRVQPL--VLGTASADHCSMLWS
   WD 3  189-227    -GK------CLLKYAGHAGSVNSIKFHP-TEQ--MALTASGDQTAHIWR
   WD 4  231-269    -QL------PLPQPPADISASLDDDVDF-SDK--DEADGDADGPNECPT
   WD 5  270-309    IRV------ATTTLKSHQGVVIAADWLV-GGK--QVVTASWDRAANLYD
   WD 6  313-351    -SE------LVHTLTGHDQELTHCCTHP-TQR--LVVTSSRDTTFRLWD
   WD 7  357-394    -IH------SVNVFQGHTDTVTSAVFTV--GD--NVVSGSDDRTVKVWD
   WD 8  398-436    -MR------SPIATIRTDSAVNRISVSA-NQR--IIALPHDNRQVRLFD
   WD 9  437-484    MNGVRLARLPRSNRQGHRRMVCCSAWNE-ENQACNLFTCGFDRQAIGWN

   WD40 Template    TGE------CLRTLSGHTSGVTSVSFSP-DGK--RLVSGSEDGTIKVWD