Input parameters:

  Query = ENSDARP00000099173 (Len=444)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000099173, Len=444):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADVTSEQYFIERFSVTCSKPVSHLQLACCPSHCAIPWKDKNIRIYENKINNLEPPLELTGHHGDVSAMVFGTERDQPIL 80  
WD40-rpts      (_____________________WD 1____________________)     (_________________WD 2______

Query       81 CSASEDYVIVWDINRCYRQIKEGGIASGRVVGTLLGRVVYLSLCPMSAKVAACSGSRVVLLNAEREEVLGVLKAHLGPVT 160 
WD40-rpts      ___________)        (___________________WD 3__________________)  (______________

Query      161 ASEFCPWDVNLLISISEDRTFKIWDVKKGGILFESAVLSAYPLLSLSFMKQNGQFITGSGDGQLWCYTLPVDHKCRLVTK 240 
WD40-rpts      ___WD 4_________________)    (_________________WD 5________________)   (________

Query      241 LDLSKLEQKHERNLRMISPPQSRTDGTARCDERGAVETAKPVLRIWPQTPKINHASLQQRGSYVWIGSSDGLCLLDLDTS 320 
WD40-rpts      __________WD 6_________________)      (________________WD 7________________)   (

Query      321 ELLSFLPLKGDLSISIAGSWVISEGLDGSMRCLVSSLFETSVVLLVVNGVRLDELCLRMAKSFSVEEQLSVMPSSPLMTT 400 
WD40-rpts      _______________WD 8______________)  (______________WD 9_____________)           

Query      401 SPLKAELAKKGPKPQRKGGWSSQNHTKHTQAFCCQIHKSPSLDL 444 
WD40-rpts                                                  

9 WD40-repeats found in QUERY=ENSDARP00000099173 (Len=444):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-47       6.02  363.51  0.00079       10.0%     54.86
  WD 2:  Seg  5    53-92       6.17  369.40  0.00065       37.5%     48.29
  WD 3:  Seg 10   101-143      4.93  318.41  0.00318       10.0%     42.02
  WD 4:  Seg 14   146-185      9.20  494.61  1.3e-05       45.0%     56.48
  WD 5:  Seg 18   190-228      8.32  458.41  4.1e-05       20.0%     54.83
  WD 6:  Seg 22   232-272      4.46  299.04  0.00580       10.0%     17.05
  WD 7:  Seg 27   279-316      7.14  409.72  0.00019       20.0%     52.73
  WD 8:  Seg 31   320-354      5.51  342.34  0.00151       22.5%     46.00
  WD 9:  Seg 35   357-389      3.45  257.15  0.02112        5.0%     15.16

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-47     MADVTSEQYFIERF---SVTCSKPVSHLQLAC--CPSHCAI--PWKDKNIRIYE
   WD 2   53-92     -LEPP-------LE---LTGHHGDVSAMVFGTERDQPILCS--ASED-YVIVWD
   WD 3  101-143    KEGGI-------ASGRVVGTLLGRVVYLSLCP--MSAKVAA--CSGSRVVLLNA
   WD 4  146-185    -EEVL-------GV---LKAHLGPVTASEFCP-WDVNLLIS--ISEDRTFKIWD
   WD 5  190-228    -GILF-------ES---AVLSAYPLLSLSFMK--QNGQFIT--GSGDGQLWCYT
   WD 6  232-272    -DHKC-------RL---VTKLDLSKLEQKHER--NLRMISPPQSRTDGTARCDE
   WD 7  279-316    -AKPV-------LR---IWPQTPKINHASLQQ--RGSYVWI--GSSDGLC-LLD
   WD 8  320-354    -SELL-------SF---LPLKG----DLSISI--AGSWVIS--EGLDGSMRCLV
   WD 9  357-389    -----------------LFETSVVLLVVNGVR--LDELCLR--MAKSFSVEEQL

   WD40 Template    TGECL-------RT---LSGHTSGVTSVSFSP--DGKRLVS--GSEDGTIKVWD