Input parameters:

  Query = ENSDARP00000101619 (Len=1292)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000101619, Len=1292):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSQVKQVGLLAAGCQPWNKDVCAASGDRFAYCATLAIYVYQLDHRYNEFKLRAIMSEHKKTITAISWCPHNPEVFASASA 80  
WD40-rpts                                                      (_________________WD 1__________

Query       81 DNLLIIWNVAEQKAVARLDNSIPASLSWCWNAGDSVAFVSHRGPLYIWTVSGPDSGVTVHKEAHSFLSDICLFRWHPLKK 160 
WD40-rpts      _______)   (________________WD 2________________)          (________________WD 3

Query      161 GKVVFGHTDGSLSIFQPGSKHQKHVLRPESLEGTDEEDPITALEWDPLSTDYLLVANMHNGIRLLDSESLCCITTFSFPS 240 
WD40-rpts      _______________)         (__________________WD 4_________________)(_____________

Query      241 AAASVQCLAWVPSAPGMFITGDSQVGVLRIWNVSRATPLDNFKLKKTGFHALHVLNSPPAKKSFSSNSPSKNHYTSSTSE 320 
WD40-rpts      _______WD 5____________________)   (__________________WD 6__________________)(__

Query      321 AVPPPTLSQNQAFSLPPGHAVCCFMDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDDPNLLATASFDGTIKVWDINT 400 
WD40-rpts      _____________WD 7_______________)(___________________WD 8___________________)   

Query      401 LTAVYTSPGNEGVVYSLSWAPGDLNCIAGATSRNGAFIWDVKKGKMITRFNEHGKNGIFCVAWSHKDSKRIATCSGDGFC 480 
WD40-rpts      (_________________WD 9_________________)   (__________________WD10______________

Query      481 IIRTIDGKVLHKYKHPAAVFGCDWSQNNKDMIATGCEDKNVRVYYLATSSDQPLKVFTGHTAKVFHVRWSPLREGILCSG 560 
WD40-rpts      ___)(__________________WD11_________________)     (_________________WD12________

Query      561 SDDGTVRIWDYTQDACINVLSGHTAPVRGLMWNTEVPYLLTSGSWDYTIRVWDTRDGTCLDTVYDHGADVYGLTCHPSRP 640 
WD40-rpts      _________)   (_________________WD13_________________)   (_________________WD14__

Query      641 FTMASCSRDSTVRLWSLTPLIAPLVVNILTDHSWDDIIGNTDLDRAMVPGAPPLLCGKVSRDIKQELDKLSSDVRMKKLR 720 
WD40-rpts      _______________)           (_________________WD15_________________)             

Query      721 WFSECFSPPGGSHNLWDLVAVINGQDDSLLPQYYGQGIMHMKHLVRFKTSEAQELTIVKMSKFGGGIGAPSKEERLKNAA 800 
WD40-rpts                  (__________________WD16__________________)                          

Query      801 EIHIRLGQIQRYCELMVELGEWEKALSVAPGVSMKYWKKLMQRRADQLMQEGNDDVIPYCIATGEVKKLVNFFTSRGQLK 880 
WD40-rpts                                                                                      

Query      881 EAVLVAQGACEGNIHVPQITSINHAANSDNDNIEKYCGMLHRVCKELAEWYFQDGCAVLAGCCHLAVDNTELALASLIRG 960 
WD40-rpts                                                                                      

Query      961 NELELAVCVGTVLGESASKATHYVLELLARKYMTTATCFPSVAHRDLAARLLQMIPDNEILLAKLCAFYPGSSAEINDLH 1040
WD40-rpts                                                                                      

Query     1041 EKCGLPSLEECKELAESAQSEGEIFQAVKYYLLSPEPEKALPIGITYVKEQLSSPDWVVDSVYQILDLLSYIRTDRLILP 1120
WD40-rpts                                                                                      

Query     1121 KCSEERNELLILCGYIGALLAIGRQYSSIVPALYEYTSQLLKRREVAVPLQIEQLSVELEAWRACTQSLKHRVADDSLYT 1200
WD40-rpts                                                                                      

Query     1201 SPSEAQKTEYSQILSRIREEPIKGLEGPDYVTGSNLPSHSDVQISCFTGLRIQGPAFFLEDGKSAISLNDALMWAKVNPF 1280
WD40-rpts                                                                                      

Query     1281 SPLGTGVRLNPF 1292
WD40-rpts                  

16 WD40-repeats found in QUERY=ENSDARP00000101619 (Len=1292):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    49-88       5.96  360.69  0.00086       22.5%     55.47
  WD 2:  Seg  8    92-129      4.72  309.73  0.00416       15.0%     57.00
  WD 3:  Seg 13   140-176      3.67  266.43  0.01588       17.5%     43.75
  WD 4:  Seg 17   186-226      5.76  352.45  0.00111       12.5%     43.42
  WD 5:  Seg 20   227-272      5.12  326.13  0.00250       15.0%     52.78
  WD 6:  Seg 24   276-317      4.40  296.60  0.00625       15.0%     44.21
  WD 7:  Seg 28   318-353      4.74  310.59  0.00405       20.0%     34.69
  WD 8:  Seg 31   354-397      7.15  410.22  0.00018       40.0%     55.32
  WD 9:  Seg 35   401-440      6.12  367.58  0.00069       22.5%     57.14
  WD10:  Seg 39   444-484      5.42  338.55  0.00170       27.5%     55.21
  WD11:  Seg 43   485-525      6.33  376.02  0.00053       20.0%     55.28
  WD12:  Seg 47   531-570      8.20  453.53  4.8e-05       42.5%     51.64
  WD13:  Seg 51   574-613      8.22  454.35  4.7e-05       42.5%     52.99
  WD14:  Seg 55   617-656      7.25  414.28  0.00016       30.0%     51.96
  WD15:  Seg 60   668-707      4.58  303.72  0.00501       12.5%     37.57
  WD16:  Seg 64   733-774      3.33  252.15  0.02462        5.0%     29.57

Multiple sequence alignment of 16 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   49-88     -F--K----LRAIMSEH-KKTITAISW---C-PHN--P-E-VFASASADNLLIIWN
   WD 2   92-129    -Q--K----AVARLDNS-IPASLSWCW---N-A----G-D-SVAFVSHRGPLYIWT
   WD 3  140-176    HK--E----A----HSF-LSDICLFRW---H-PLK--K-G-KVVFGHTDGSLSIFQ
   WD 4  186-226    LR--P----ESLEGTDE-EDPITALEW---D-PLS--T-D-YLLVANMHNGIRLLD
   WD 5  227-272    SE--SLCCITTFSFPSA-AASVQCLAW---V-P-SAPG-M-FITGDSQVGVLRIWN
   WD 6  276-317    -A--T----PLDNFKLK-KTGFHALHVLNSP-P-A--K-K-SFSSNSPSKNHYTSS
   WD 7  318-353    TS--E----AVPPPTLS-QN----QAF---S-L-P--P-G-HAVCCFMDGGVGLYD
   WD 8  354-397    MG--A-KKWDFLRDLGH-VETIFDCKF---K-P-D--DPN-LLATASFDGTIKVWD
   WD 9  401-440    -L--T----AVYTSPGN-EGVVYSLSW---A-PGD--L-N-CIAGATSRNGAFIWD
   WD10  444-484    -G--K----MITRFNEHGKNGIFCVAW---SHK-D--S-K-RIATCSGDGFCIIRT
   WD11  485-525    ID--G----KVLHKYKH-PAAVFGCDW---S-Q-N--N-KDMIATGCEDKNVRVYY
   WD12  531-570    -D--Q----PLKVFTGH-TAKVFHVRW---S-P-L--R-EGILCSGSDDGTVRIWD
   WD13  574-613    -D--A----CINVLSGH-TAPVRGLMW---N-T-E--V-PYLLTSGSWDYTIRVWD
   WD14  617-656    -G--T----CLDTVYDH-GADVYGLTC---H-P-S--R-PFTMASCSRDSTVRLWS
   WD15  668-707    IL--T----DHSWDDII-GNTDLDRAM---V-P-G--A-P-PLLCGKVSRDIKQEL
   WD16  733-774    HNLWD----LVAVINGQ-DDSLLPQYY---G-Q-G--I-M-HMKHLVRFKTSEAQE

   WD40 Template    TG--E----CLRTLSGH-TSGVTSVSF---S-P-D--G-K-RLVSGSEDGTIKVWD