Input parameters:

  Query = ENSDARP00000103919 (Len=650)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000103919, Len=650):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAADGGRAALPCAFSPKSHQFLALCAQDGRLRIWNTESKTLQQEYVPSAHLSAACTCVTWGPCRAVQEVPQRKRRKCDAA 80  
WD40-rpts      (_______________WD 1______________)                            (________________

Query       81 SSAEQSDLLALGTAAGTILIYSTLKGDLHCTLDGGHSGPVNSVQWHPEDSVLYSGSDDTHIAEWDLKTGKVCCKWKADRS 160 
WD40-rpts      _WD 2________________)   (_________________WD 3_________________)   (___________

Query      161 AISSLCISPDGKMLLSAGMTIKMWDLETKEVYRKFTGHSTMVTTLCFATTRPPDSNGMYFLSGAVHDRLLSVWQVRSDGK 240 
WD40-rpts      _____WD 4_______________)   (____________________WD 5____________________)(_____

Query      241 DKNSVVSFTLTDEPQHIDLQTSNSKDEAVRLAVVCKDGQLHLFEHFLNGQCKKPLSPACSLQVSTMKGESPVPVPLLAAA 320 
WD40-rpts      ____________WD 6________________)   (_________________WD 7________________)     

Query      321 LCADRQNLMLAYGHHLQPVMEKTPFNTSERHTCLNRDVHATLSLSVDTTVSKVKTPVVNQQSKVLIPGVPGHKAPIKLTP 400 
WD40-rpts                  (__________________WD 8__________________)        (_________________

Query      401 NEGEKRKKGASTTEVSIEERLEQIELSAGRKGADKGSSSLQTDSFAVLLVQGLESKDEKILNKIFQTKKETLIKNTVARL 480 
WD40-rpts      ______WD 9_______________________)                                              

Query      481 PPPAVLPLLEELSRRLQGHPYAALLIVHWFKAVLTQHTSYLSSLPDLVSQLGSIYQMIESRVKLYHQITRLHGKLYLLMT 560 
WD40-rpts                                                                                      

Query      561 QVATSNSATKVGEIDHTAKLVYEEESSEDEDSGDEGRPEDDSDNWEEDEEAMEVTGDKKNHKEEEDQDMNEESKANGDSD 640 
WD40-rpts                                                                                      

Query      641 LDPENESEEE 650 
WD40-rpts                

9 WD40-repeats found in QUERY=ENSDARP00000103919 (Len=650):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-35       5.12  325.99  0.00251       20.0%     41.94
  WD 2:  Seg  6    64-102      5.88  357.48  0.00095       15.0%     50.14
  WD 3:  Seg 10   106-145      8.50  465.71  3.3e-05       42.5%     59.39
  WD 4:  Seg 14   149-185      6.96  402.06  0.00024       37.5%     52.39
  WD 5:  Seg 18   189-234      6.16  368.98  0.00066       32.5%     56.42
  WD 6:  Seg 22   235-273      4.97  319.96  0.00303       15.0%     36.32
  WD 7:  Seg 25   277-315      5.18  328.73  0.00231       15.0%     40.54
  WD 8:  Seg 30   333-374      4.86  315.61  0.00347       12.5%     48.78
  WD 9:  Seg 34   383-434      4.63  305.99  0.00467       10.0%     -7.89

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-35     -------MAADG-GRA-ALPCAFSP------KSHQFL---ALCA-QDGR-------------LRIWN
   WD 2   64-102    -R--AVQEVPQR-KRRKCDAASSAE------QS-DLL---ALGT-AAGT-------------ILIYS
   WD 3  106-145    -G--DLHCTLDGGHSGPVNSVQWHP------ED-SVL---YSGS-DDTH-------------IAEWD
   WD 4  149-185    -G--KVCCKWKA-DRSAISSLCISP------DG-KML---LSAG---MT-------------IKMWD
   WD 5  189-234    -K--EVYRKFTG-HSTMVTTLCFATTRPPDSNG-MYF---LSGAVHDRL-------------LSVWQ
   WD 6  235-273    ------VRSDGK-DKNSVVSFTLTD------EP-QHIDLQTSNS-KDEA-------------VRLAV
   WD 7  277-315    -D--GQLHLFEH-FLNGQCKKPLSP------AC-SLQ---VSTM-KGES-------------PVPVP
   WD 8  333-374    GHHLQPVMEKTP-FNTSERHTCLNR------DV-HAT---LSLS-VDTT-------------VSKVK
   WD 9  383-434    -K--VLIPGVPG-HKAPIKLTPNEG------EK-RKK---GAST-TEVSIEERLEQIELSAGRKGAD

   WD40 Template    TG--ECLRTLSG-HTSGVTSVSFSP------DG-KRL---VSGS-EDGT-------------IKVWD