Input parameters:

  Query = ENSDARP00000104487 (Len=719)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000104487, Len=719):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDEQPGGGGGGGGGGGGGGMAAQRQQQQPAPQQGNNSINPQMNSAGGAPMVQQQQDEMPRPQQYTIPGILHYIQHEWARF 80  
WD40-rpts                                                                                      

Query       81 EMERAHWEVERAELQARIAFLQGERKGQENLKNDLVRRIKMLEYALKQERAKYHKLKYGTELNQGEVKMPSFESEDTKDT 160 
WD40-rpts                                                                                      

Query      161 EVSAIPQNSQLTWKQGRQLLRQYLQEVGYTDTILDVRTQRVRSLLGLSGSEQNGSVETKNLEQILNGGESPAKRKGQDMK 240 
WD40-rpts                                                                                      

Query      241 RNPEVLETFNFLENADDSDEEDDDEGDIMEDVPDRSDKRRIKKHKIKVGNEGLASDLPDDPDTEDALKEFDFLVNAEDGE 320 
WD40-rpts                                              (________________WD 1________________)__

Query      321 GAGEARSSGDGTEWAEPLPFTPGGGKSFIMGSDDMLESVLGLGDLADLTVSNDEAEYSYDLPANKDAFRKTWNPKYTLRS 400 
WD40-rpts      _________________WD 2___________________)                           (___________

Query      401 HFDGVRALAFHPVEPVLVTVSEDHTLKLWNLHKTVPAKKSASFDVEPIYTFRGHIGPVLSLAVTSSGEQCFSGGIDSTIQ 480 
WD40-rpts      _______WD 3__________________)              (_________________WD 4______________

Query      481 WWNIPSSNVDPYDTYDPSVLAGTLLGHSDAVWGLAYSGIKNRLLSCSADGTIKLWDPQEKIPCLSTFNSDKDHGVPTSVD 560 
WD40-rpts      __)              (_________________WD 5________________)(____________________WD 

Query      561 FNGCDPAHMVASYNTGDAVVYDLETSQPVVVFSAQGESAIPFGNHINKVVTHPTLPITVTAHEDRHIKFFDNKSGKAIHA 640 
WD40-rpts      6____________________)   (____________________WD 7____________________)   (_____

Query      641 MVAHLDAVTSLAIDPNGIYLMSGSHDSSIRLWNLDSKTCVQEVTAHRKKSDEAIYDVAFHPSKAYIGSAGADALAKVFV 719 
WD40-rpts      ____________WD 8________________)   (___________________WD 9__________________)

9 WD40-repeats found in QUERY=ENSDARP00000104487 (Len=719):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   281-318      4.76  311.15  0.00398       12.5%     24.47
  WD 2:  Seg  3   318-361      6.51  383.70  0.00042       30.0%     44.55
  WD 3:  Seg  9   389-430      9.09  490.04  1.5e-05       37.5%     43.98
  WD 4:  Seg 13   445-483      8.41  462.03  3.7e-05       32.5%     52.87
  WD 5:  Seg 17   498-536      8.87  480.90  2.1e-05       42.5%     45.64
  WD 6:  Seg 20   537-582      5.40  337.84  0.00174       32.5%     53.09
  WD 7:  Seg 24   586-631      6.16  368.95  0.00066       22.5%     56.23
  WD 8:  Seg 28   635-673     10.01  528.05  4.7e-06       35.0%     54.19
  WD 9:  Seg 32   677-719      6.67  390.34  0.00034       22.5%     50.36

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  281-318    -I--K---KHKIKVGN-------E----GLASDLPDDP-DT-E-DALKEFDFLVNAED
   WD 2  318-361    DG--EGAGEARSSGDG-------T----EWAEPLPFTP-GGGKSFIMGSDDMLESVLG
   WD 3  389-430    RKTWN---PKYTLRSH-------F----DGVRALAFHP-VE-PVLVTVSEDHTLKLWN
   WD 4  445-483    -V--E---PIYTFRGH-------I----GPVLSLAVTS-SG-EQCFSGGIDSTIQWWN
   WD 5  498-536    -S--V---LAGTLLGH-------S----DAVWGLAYSG-IK-NRLLSCSADGTIKLWD
   WD 6  537-582    PQ--EKIPCLSTFNSD-------K--DHGVPTSVDFNGCDP-AHMVASYNTGDAVVYD
   WD 7  586-631    -S--Q---PVVVFSAQGESAIPFG----NHINKVVTHP-TL-PITVTAHEDRHIKFFD
   WD 8  635-673    -G--K---AIHAMVAH-------L----DAVTSLAIDP-NG-IYLMSGSHDSSIRLWN
   WD 9  677-719    -K--T---CVQEVTAH-------RKKSDEAIYDVAFHP-SK-AYIGSAGADALAKVFV

   WD40 Template    TG--E---CLRTLSGH-------T----SGVTSVSFSP-DG-KRLVSGSEDGTIKVWD