Input parameters:

  Query = ENSDARP00000104791 (Len=813)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000104791, Len=813):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEDGFSSYSSLYDTSSLLQFCNDDSASATSSMEVTDRIASLEQRVQMQEDEIQLLKSALADVVRRLNISEEQQAMLNKKG 80  
WD40-rpts                                                                                      

Query       81 PTKARPMIAALPLRPTVNNGTVLPKKGGTLPSPSNCKKDNNSPATRSTVKRTSSSEHVGPNNRKDSGVDSKNNRTRAGST 160 
WD40-rpts                                                                                      

Query      161 GSNSSGKKTTETKQREPVFSADEGYVKMYLKGRPITMYMPKDLVDTYCLETKADLPPKKLKLDWVYGYRGRDCRSNLYLL 240 
WD40-rpts                          (________________WD 1________________)                      

Query      241 PTGETVYFIASVVVLYNVDEQLQRHYTGHTDDIKCLAVHPDKITIATGQVAGTSSDGKQLAPHVRVWDSVSLNTLHILGN 320 
WD40-rpts                         (______________________WD 2_____________________)   (________

Query      321 GFFDRALVCLSFSKSNGGSWLCVVDDSNDHMLSVWDWQREDRLAEVKCSNESVFAADFHPTDANIIVTCGKSHLCFWSLE 400 
WD40-rpts      ____________WD 3___________________)   (_________________WD 4________________)  

Query      401 KGSLVKKQGLFEKQEKPKFVLCVTFSENGDAITGDSSGNILVWGKGSNRISLAIQGAHEASVFALCMLRNGTLVSGGKDR 480 
WD40-rpts              (_______________WD 5_______________)(__________________WD 6_____________

Query      481 KLISWDENFQKIQTVEVPELYGPVRTVAEGRGETVLIGTTKNYVLQGSLNGEFIPITQGHTDELWGLTIHPLKHQFLTCG 560 
WD40-rpts      _____)   (_________________WD 7________________)  (_________________WD 8________

Query      561 HDKHIYLWDSDSHQPIWTKTLEDSAQSAGFHPSGATVAVGMQTGRWLVLDTESKDLVTVHTDGNEQLSVIRFSPDGNFLA 640 
WD40-rpts      ________)  (_________________WD 9________________)   (_________________WD10_____

Query      641 IGSHDNYIYIYAVAENGKKYSRVGKCSGHSSFITHLDWSVDSQYLVSNSGDYEILYWIPSVCKQVVSVETTRDIEWATFT 720 
WD40-rpts      ___________)       (_________________WD11________________)                      

Query      721 CTLGFHVFGLWPDGSDGTDINAVCSSYAKRLLVTGDDFGKVHLFSFPCSQSRAPSHIYSGHSSHVTNVNFLFDDSHLVST 800 
WD40-rpts       (___________________WD12___________________)      (_________________WD13_______

Query      801 GGKDMSIMQWRVV 813 
WD40-rpts      __________)  

13 WD40-repeats found in QUERY=ENSDARP00000104791 (Len=813):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   181-218      3.68  266.72  0.01573       10.0%      1.33
  WD 2:  Seg  9   260-308      7.17  410.72  0.00018       30.0%     52.88
  WD 3:  Seg 13   312-356      5.52  342.67  0.00150       27.5%     44.69
  WD 4:  Seg 17   360-398      7.28  415.40  0.00016       12.5%     56.81
  WD 5:  Seg 22   409-444      5.71  350.45  0.00118       27.5%     44.87
  WD 6:  Seg 25   445-486      6.30  374.88  0.00055       30.0%     54.28
  WD 7:  Seg 29   490-528      5.55  344.06  0.00144        7.5%     52.12
  WD 8:  Seg 33   531-569      8.45  463.72  3.5e-05       25.0%     54.87
  WD 9:  Seg 37   572-610      6.61  387.90  0.00037       20.0%     55.65
  WD10:  Seg 41   614-652      8.46  464.09  3.5e-05       25.0%     58.84
  WD11:  Seg 45   660-698      8.29  456.95  4.3e-05       35.0%     50.44
  WD12:  Seg 51   722-765      5.85  356.22  0.00098       20.0%     42.81
  WD13:  Seg 55   772-811      6.78  394.64  0.00030       40.0%     49.62

Multiple sequence alignment of 13 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  181-218    ADE---------GYVKM--YLKGRPITMYMPKDLV----DTY-CLETKA----------DLPPK
   WD 2  260-308    -EQ---L----QRHYTG--HTDDIKCLAVHPDKIT----IAT-GQVAGTSSDGKQLAPHVRVWD
   WD 3  312-356    -LN---T----LHILGNGFFDRALVCLSFSKSNGGSWLCVVD-DSNDHM----------LSVWD
   WD 4  360-398    -ED---R----LAEVKC--SNESVFAADFHPTDAN----IIV-TCGKSH----------LCFWS
   WD 5  409-444    ------G----LFEKQE--KPKFVLCVTFSENGDA----I-T-GDSSGN----------ILVWG
   WD 6  445-486    KGSNRIS----LAIQGA--HEASVFALCMLRNGT-----LVS-GGKDRK----------LISWD
   WD 7  490-528    -QK---I----QTVEVP--ELYGPVRTVAEGRGET----VLI-GTTKNY----------VLQGS
   WD 8  531-569    -GE---F----IPITQG--HTDELWGLTIHPLKHQ----FLT-CGHDKH----------IYLWD
   WD 9  572-610    -SH---Q----PIWTKT--LEDSAQSAGFHPSGAT----VAV-GMQTGR----------WLVLD
   WD10  614-652    -KD---L----VTVHTD--GNEQLSVIRFSPDGNF----LAI-GSHDNY----------IYIYA
   WD11  660-698    -YS---R----VGKCSG--HSSFITHLDWSVDSQY----LVS-NSGDYE----------ILYWI
   WD12  722-765    TLG---FHVFGLWPDGS--DGTDINAVCSSYAKRL----LVT-GDDFGK----------VHLFS
   WD13  772-811    -RA---P----SHIYSG--HSSHVTNVNFLFDDSH----LVSTGGKDMS----------IMQWR

   WD40 Template    TGE---C----LRTLSG--HTSGVTSVSFSPDGKR----LVS-GSEDGT----------IKVWD