Input parameters:

  Query = ENSDARP00000106510 (Len=512)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000106510, Len=512):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLIWTRSTAEPAPGKGPKGAFQIARQIKAHDGSVFTLCQMRNGTLLTGGGKDHKIILWDHDLHPERDIEVPDQYGTIRAV 80  
WD40-rpts                              (_______________WD 1______________)(___________________W

Query       81 AEGKGDQFLVGTSRNFILRGTFNDGFQVEVQGHTDELWGLATHPFKDLFLTCAQDRQVCLWSSVDHVLEWTRLLDEHGHC 160 
WD40-rpts      D 2__________________)(_________________WD 3_________________)  (_______________

Query      161 ADFHPSGSVVAIGTHSGKWYVLDAETRDLIAIHTDGNEQLSVMRYSVDGTLLAVGSHDNFIYLYTVSDKGRKYSRYGKCT 240 
WD40-rpts      __WD 4________________)   (_________________WD 5________________)       (_______

Query      241 GHSSYITHLDWSPDNKFIMSNSGDYEILYWDIPNGCKLIRNRSECKDIDWATYTCVLGFHVFGVWPEGSDGTDINALIRS 320 
WD40-rpts      __________WD 6________________)                          (__________________WD 7

Query      321 HNRKVIALADDFCKVHLFQYPCSRPKAPSHKYSAHSSHVTNVSFMHNDSHLVSTGGKDMSIMQWRLVEKTSSLVHSDSSL 400 
WD40-rpts      __________________)      (_________________WD 8_________________)     (_________

Query      401 GFGDSFLNNSTPRGLPSVPSIPNTPTEPVPMAVPVSLAISTHPDSNTPPPTPPEPLHKATPNGQQDGSPETPPPSDDATP 480 
WD40-rpts      ________WD 9________________)                                                   

Query      481 PSDSTLSPKDSLEPSDDTATPSDEGTPFNPPL 512 
WD40-rpts                                      

9 WD40-repeats found in QUERY=ENSDARP00000106510 (Len=512):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    25-59       8.13  450.55  5.3e-05       25.0%     47.43
  WD 2:  Seg  5    60-102      5.72  350.89  0.00116       12.5%     52.48
  WD 3:  Seg  9   103-142      9.23  496.03  1.3e-05       15.0%     56.56
  WD 4:  Seg 13   145-183      7.52  425.32  0.00012       20.0%     56.68
  WD 5:  Seg 17   187-225      8.41  461.93  3.7e-05       20.0%     57.68
  WD 6:  Seg 21   233-271      8.99  485.82  1.8e-05       35.0%     52.28
  WD 7:  Seg 27   298-339      6.11  366.88  0.00071        5.0%     51.82
  WD 8:  Seg 31   346-385      7.24  413.55  0.00017       32.5%     50.44
  WD 9:  Seg 35   391-429      6.50  383.28  0.00043       12.5%     42.41

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   25-59     --------RQ--IKAHDGSVFTLCQMRNGTLL-TGGGKDHKIILWD
   WD 2   60-102    HDLHPERDIE--VPDQYGTIRAVAEGKGDQFL-VGTSRNFILRGTF
   WD 3  103-142    ND---GFQVE--VQGHTDELWGLATHPFKDLF-LTCAQDRQVCLWS
   WD 4  145-183    -D---HVLEW--TRLLDEHGHCADFHPSGSVV-AIGTHSGKWYVLD
   WD 5  187-225    -R---DLIAI--HTDGNEQLSVMRYSVDGTLL-AVGSHDNFIYLYT
   WD 6  233-271    -Y---SRYGK--CTGHSSYITHLDWSPDNKFI-MSNSGDYEILYWD
   WD 7  298-339    GF---HVFGVWPEGSDGTDINALIRSHNRKVI-ALADDFCKVHLFQ
   WD 8  346-385    -K---APSHK--YSAHSSHVTNVSFMHNDSHLVSTGGKDMSIMQWR
   WD 9  391-429    -S---SLVHS--DSSLGFGDSFLNNSTPRGLP-SVPSIPNTPTEPV

   WD40 Template    TG---ECLRT--LSGHTSGVTSVSFSPDGKRL-VSGSEDGTIKVWD