Input parameters:

  Query = ENSDARP00000107637 (Len=311)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000107637, Len=311):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVLRINENWKKMKTKTIGLVLCRVRPHKPKRKKVLEFERLYLDNLPSASMYERSYMHRDVITHIVCSKTDFILTASQDGH 80  
WD40-rpts          (_________________WD 1_________________)   (________________WD 2____________

Query       81 VKFWKKKEDEGVEFVKHFRSHLGVIECISVSAEGALLCSVGDDQAMKVFDVVNFDMINMLKLGFHPGQCEWIYNPGDAIS 160 
WD40-rpts      ____)      (_________________WD 3________________)(___________________WD 4______

Query      161 TIACSEKSTGKIFVYDGRGSNQPLHVFEKMHTTPLSQIRLNPKYRVIVSADKAGMLEYWTGLPSEFKFPRQVDWEFKTDT 240 
WD40-rpts      _____________) (____________________WD 5___________________)                  (_

Query      241 DLYEFAKCGTYPTSLAFSQDGKKMATIAVDRKVRIFRFLTGKLMRVFDESLTMFTELQQMRQQLPDMEFGR 311 
WD40-rpts      ________________WD 6________________)                                  

6 WD40-repeats found in QUERY=ENSDARP00000107637 (Len=311):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     5-44       6.89  399.30  0.00026       12.5%     18.97
  WD 2:  Seg  4    48-85       7.37  419.29  0.00014       20.0%     49.59
  WD 3:  Seg  8    92-130      8.82  478.87  2.2e-05       27.5%     54.94
  WD 4:  Seg 12   131-174      7.07  406.56  0.00021       17.5%     52.74
  WD 5:  Seg 16   176-220      8.00  444.95  6.3e-05       20.0%     53.33
  WD 6:  Seg 20   239-277      7.88  440.01  7.3e-05       22.5%     55.10

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    5-44     IN-----EN----WKKMKTKTIGLVLCRVRPHKPKRKKVLEFERLYLDN
   WD 2   48-85     -A-----SM----YERSYMHRDVITHIVCSKTD-FILTASQDGHVKFWK
   WD 3   92-130    -V-----EF----VKHFRSHLGVIECISVSAEGALLCSVGDDQAMKVFD
   WD 4  131-174    VV-----NFDMINMLKLGFHPGQCEWIYNPGDAISTIACSEKSTGKIFV
   WD 5  176-220    DGRGSNQPL----HVFEKMHTTPLSQIRLNPKYRVIVSADKAGMLEYWT
   WD 6  239-277    -D-----TD----LYEFAKCGTYPTSLAFSQDGKKMATIAVDRKVRIFR

   WD40 Template    TG-----EC----LRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD