Input parameters:

  Query = ENSDARP00000107806 (Len=449)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000107806, Len=449):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLRWILGGREAQGAVEKSAALFIGEEQPKNCFTEMQVLKGHFDIVRFLVQIDDLRFASAGDDGLVLIWNVETGDCLLELR 80  
WD40-rpts                                     (________________WD 1________________)   (_______

Query       81 GHTQQITAMTSYTFIRGGNTHTALITASSDRTLSLWDPDSGNRVQNISDLQSSVKCLLVLNLLDMWLSGGNELCVWNQDF 160 
WD40-rpts      _____________WD 2___________________)   (________________WD 3_______________)   

Query      161 ELQCKTVHHSDTGISAMVELPKNFIAAAMDKEIVIFKLNVSGSDVAVMAIRHLADHQDTIHSLISINDGLFASGSHIGEL 240 
WD40-rpts      (________________WD 4_______________)         (________________WD 5_____________

Query      241 IIWDSVDWTIQGYELILWEESKGDGHSEVKVTQQKQIERSIQHMSSDGELLVAAVGSGLYVYNVLTKTVVAYRKMAHDSN 320 
WD40-rpts      ___)                     (________________WD 6________________)    (____________

Query      321 VLHTMIQTDGLMSCSEDGSVRMWELQDLPLPAEPASSGFFGMFGTFGRSSKHAGPPAKKLPEVPDLRSLELIGDLIGHSG 400 
WD40-rpts      ____WD 7_______________)  (_________________WD 8________________)   (___________

Query      401 AVQMFVSFEQKALVTCSTDHLLIVWKDGELQSQLRSLAVFQKLEENQQL 449 
WD40-rpts      _____WD 9________________)                       

9 WD40-repeats found in QUERY=ENSDARP00000107806 (Len=449):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    32-69       7.25  414.20  0.00016       25.0%     51.29
  WD 2:  Seg  7    73-117      7.96  443.65  6.5e-05       35.0%     54.68
  WD 3:  Seg 11   121-157      6.57  385.93  0.00039       20.0%     50.10
  WD 4:  Seg 15   161-197      6.63  388.42  0.00036       12.5%     53.42
  WD 5:  Seg 19   207-244      7.41  420.71  0.00013       30.0%     43.77
  WD 6:  Seg 23   266-303      6.07  365.22  0.00074       15.0%     50.51
  WD 7:  Seg 27   308-344      7.25  414.22  0.00016       30.0%     49.65
  WD 8:  Seg 30   347-385      6.32  375.88  0.00053        7.5%     37.89
  WD 9:  Seg 33   389-426      7.39  420.01  0.00014       32.5%     49.68

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   32-69     FTEMQVLKGHFDIVRFL-V------QIDDLRFASAGDDGLVLIWN
   WD 2   73-117    GDCLLELRGHTQQITAMTSYTFIRGGNTHTALITASSDRTLSLWD
   WD 3  121-157    GNRVQNISDLQSSVKCLLV------LNLLDMWLSGGNE--LCVWN
   WD 4  161-197    ELQCKTVHHSDTGISAMVE------LPKN--FIAAAMDKEIVIFK
   WD 5  207-244    VMAIRHLADHQDTIHSLIS------INDG-LFASGSHIGELIIWD
   WD 6  266-303    HSEVKVTQQKQIERSIQHM------SSDGELLVAAV-GSGLYVYN
   WD 7  308-344    TVVAYRKMAHDSNVLHTMI------QTDG--LMSCSEDGSVRMWE
   WD 8  347-385    DLPLPAEPASSGFFGMFGT------FGRSSKHAGPPAKKLPEVPD
   WD 9  389-426    LELIGDLIGHSGAV-QMFV------SFEQKALVTCSTDHLLIVWK

   WD40 Template    GECLRTLSGHTSGVTSVSF------SPDGKRLVSGSEDGTIKVWD