Input parameters:

  Query = ENSDARP00000108102 (Len=417)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000108102, Len=417):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGRVDKNYPLVVGHSGPVLDIDWCPHNDNILASCSEDTTAMVWQIPDHTPSRPISEPIVVLEGHSKRVGIIKWHPTARNI 80  
WD40-rpts      (___________________WD 1___________________)          (_________________WD 2____

Query       81 LLTAGSDNLIIIWNVGTGEALITMDDHPDLIYSVGWNYNGSLFCTTCKDRRLRVCDPRKNEVVAERLSPHEGIRPMRAIF 160 
WD40-rpts      _____________)   (_________________WD 3________________)   (___________________W

Query      161 TREGNIFTTGFTRMSQRELGLWDPTNFEEPIALLELDTSNGVLLPFYDPDTNIVYLSGKGDSSIRYFEITEEPPYVHYIS 240 
WD40-rpts      D 4___________________)(____________________WD 5___________________)            

Query      241 TFSSKEPQRGMGFMPKRGVDVSKCEIARLYKLHERKCEPIMMTVPRKSDLFQDDLFPDTAGPDPAVEPEEWMDGRDADPI 320 
WD40-rpts                                                                                      

Query      321 LVSMRDGYVPPKSRELKVSKKNVLDSRPATRRSMSAVDGSSLPSVSWSPDSFTGSNTPQLLEKLIEEIQNLKATVLSQEK 400 
WD40-rpts                                                                                      

Query      401 RICDLENKLSKYTNGTV 417 
WD40-rpts                       

5 WD40-repeats found in QUERY=ENSDARP00000108102 (Len=417):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-44       7.96  443.36  6.6e-05       32.5%     46.65
  WD 2:  Seg  5    55-94       7.11  408.32  0.00020       25.0%     51.58
  WD 3:  Seg  9    98-136      8.82  479.13  2.2e-05       27.5%     56.15
  WD 4:  Seg 13   140-183      3.96  278.42  0.01097       17.5%     49.83
  WD 5:  Seg 17   184-228      4.96  319.43  0.00308       20.0%     42.04

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-44     MGRVDKNYPLVV----GHSGP--VLDIDWCPHNDNI-L-ASCS---EDTTAMVWQ
   WD 2   55-94     -SEP---IVVLE----GHSKR--VGIIKWHP-TARNIL-LTAG---SDNLIIIWN
   WD 3   98-136    -GEA---LITMD----DHPDL--IYSVGWNY-NGSL-F-CTTC---KDRRLRVCD
   WD 4  140-183    -NEV---VAERL----SPHEGIRPMRAIFTR-EGNI-F-TTGFTRMSQRELGLWD
   WD 5  184-228    PTNF---EEPIALLELDTSNG--VLLPFYDP-DTNI-VYLSGK---GDSSIRYFE

   WD40 Template    TGEC---LRTLS----GHTSG--VTSVSFSP-DGKR-L-VSGS---EDGTIKVWD