Input parameters:

  Query = ENSDARP00000109028 (Len=215)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000109028, Len=215):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MENGFKVCCVAPRPSEPDVFLCGGFSPEVRAWDSRCCKVLHVYRSAVQQTLDLLFVNAGREFVSSTDAVSRDSADRTLIV 80  
WD40-rpts      (______________WD 1_____________)   (____________________WD 2___________________

Query       81 WDFQTNAKLSNQIFHERYTCPCLTAHPLDNSFIAQTNGNYIALFSDQRPYRMNKRRRYEGHKVEGFAVHCGFSADGSVVA 160 
WD40-rpts      _)   (_________________WD 3_________________)      (__________________WD 4______

Query      161 SGSSTGSVHFYDYQSSRTLKTLQAHEDACVCVEMHPIIPGVAATADWTGQINLWT 215 
WD40-rpts      ___________)   (_________________WD 5_________________)

5 WD40-repeats found in QUERY=ENSDARP00000109028 (Len=215):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-33       5.42  338.75  0.00169       15.0%     46.45
  WD 2:  Seg  4    37-82       7.63  430.00  1.0e-04       27.5%     49.72
  WD 3:  Seg  8    86-125      6.53  384.20  0.00041       10.0%     53.97
  WD 4:  Seg 12   132-172      7.34  417.77  0.00015       30.0%     47.34
  WD 5:  Seg 16   176-215      7.40  420.49  0.00013       22.5%     51.14

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-33     -------MENGF-K--VCCVAPRPSEPD-VFLC-------GGFSPEVRAWD
   WD 2   37-82     CKVLHVYRSAVQ-Q--TLDLLFVN-AGR-EFVSSTDAVSRDSADRTLIVWD
   WD 3   86-125    NAKLSNQIFHERYT--CPCLTAHP-LDN-SFIA-------QTNGNYIALFS
   WD 4  132-172    MNKRRRYEGHKV-EGFAVHCGFSA-DGS-VVAS-------GSSTGSVHFYD
   WD 5  176-215    SRTLKTLQAHED-A--CVCVEMHP-IIPGVAAT-------ADWTGQINLWT

   WD40 Template    GECLRTLSGHTS-G--VTSVSFSP-DGK-RLVS-------GSEDGTIKVWD