Input parameters:

  Query = ENSDARP00000109161 (Len=206)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000109161, Len=206):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 TLTGHSRKVTAARFKYSQRQVVTGSADRTVKIWDLQRAACMCHKIKNLSCINDVVCSEYLIISSHYDKKIRFWDSRAATC 80  
WD40-rpts      (______________WD 1______________)   (________________WD 2_______________)   (__

Query       81 TQEVPLQGRVTSLDLCPNHRQLLSCSRDNILQLVDLRKSNDRVAFRAEGFKCGSDSTKAIFSPDGSFLAAGSADGAVYIW 160 
WD40-rpts      ______________WD 3________________)   (___________________WD 4__________________

Query      161 NVNTGNLEKHLPDMHSAPISALAWSLSGEYVVSVDKSRRAVLWSDI 206 
WD40-rpts      )   (_________________WD 5_________________)  

5 WD40-repeats found in QUERY=ENSDARP00000109161 (Len=206):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-34       9.55  509.17  8.5e-06       37.5%     39.49
  WD 2:  Seg  4    38-74       7.07  406.86  0.00020       22.5%     54.23
  WD 3:  Seg  8    78-115      7.62  429.34  0.00010       25.0%     56.02
  WD 4:  Seg 12   119-161      8.39  461.03  3.8e-05       32.5%     54.54
  WD 5:  Seg 16   165-204      8.08  448.32  5.6e-05       20.0%     51.68

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-34     -----TL-TGHS----RKVTAARFKYSQRQVVTGSADRTVKIWD
   WD 2   38-74     AACMCHK-IKNL----SCINDVVCSE--YLIISSHYDKKIRFWD
   WD 3   78-115    ATCTQEV-PLQ-----GRVTSLDLCPNHRQLLSCSRDNILQLVD
   WD 4  119-161    SNDRVAF-RAEGFKCGSDSTKAIFSPDGSFLAAGSADGAVYIWN
   WD 5  165-204    GNLEKHLPDMHS----APISALAWSLSGEYVVSVDKSRRAVLWS

   WD40 Template    GECLRTL-SGHT----SGVTSVSFSPDGKRLVSGSEDGTIKVWD