Input parameters:

  Query = ENSDARP00000110672 (Len=480)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000110672, Len=480):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGEVRKLQKKLRQIENLEIKISLTPEEKIKVSKKAELRSRLAELLLQLSGPQQTQGIVGKEEDKMKRQVEEVTEQHVGHR 80  
WD40-rpts                            (_____________________WD 1_____________________)          

Query       81 PALKIAREERRENEASDGNQTDGRGETNLPVSLTEEEQEDAEFRSRKQTWEKAKFRLRALEGHSDIITCAVAVDNLVISG 160 
WD40-rpts                 (_________________WD 2_________________)  (_________________WD 3_____

Query      161 SLSRDTTVKVWHVPTATEQRNLGGHSGGVTCLCAPPPESCKRLARAFDLADKERFVLSGSTDCCVKIWALSSGQCVKSIY 240 
WD40-rpts      ___________)   (________________________WD 4________________________)   (_______

Query      241 TFNAVTSLCFIPEGECVSLLISDAGKLQVWSWSSLENWLSVNAHLDAVTTLQSHGPLVFSGSAEGSVCVWEVCDEGPEPL 320 
WD40-rpts      __________WD 5________________)   (________________WD 6_______________)         

Query      321 RRLHLWGPEVTGCGKEDGLNGRLVLSPRGDRVFLSCGKASIRILNWRTGVMTRLANHSSTAGVTDCVNQIPGLLIASCFD 400 
WD40-rpts               (_______________WD 7_______________)(_____________________WD 8_________

Query      401 LANGESTINLFSLPQCKYLVSLTSSDLPRILCFAAWLTASGDHRWVTGGHDLIVWEQLPGTFKKRSDVNVRRDGNLSDCI 480 
WD40-rpts      ___________)   (__________________WD 9_________________)                        

9 WD40-repeats found in QUERY=ENSDARP00000110672 (Len=480):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    23-70       2.87  233.08  0.04407       10.0%     14.32
  WD 2:  Seg  4    92-131      5.35  335.83  0.00185       12.5%     27.18
  WD 3:  Seg  6   134-172      8.49  465.29  3.3e-05       32.5%     51.02
  WD 4:  Seg 10   176-229      7.67  431.39  9.5e-05       35.0%     56.24
  WD 5:  Seg 14   233-271      6.91  399.91  0.00025       30.0%     55.34
  WD 6:  Seg 18   275-311      7.60  428.66  0.00010       27.5%     49.57
  WD 7:  Seg 23   330-365      7.15  409.95  0.00019       12.5%     48.01
  WD 8:  Seg 26   366-412      5.72  351.10  0.00115       25.0%     47.73
  WD 9:  Seg 30   416-456      3.66  265.80  0.01619       12.5%     53.40

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   23-70     LTP-EE--KIKV--SK--K---AELRSRLAELLLQLSGPQ---------------QTQGIVG----KEED-KMKRQVE
   WD 2   92-131    ENE-ASDGNQTDGRGE--T---NLP----------VSLTE---------------EEQEDAE----F--R-SRKQTWE
   WD 3  134-172    -KF-RL--RALEGHSD--I---ITC----------AVAVD---------------NLVISGS----LSRD-TTVKVWH
   WD 4  176-229    -AT-EQ--RNLGGHSG--G---VTC----------LCAPPPESCKRLARAFDLADKERFVLS----GSTD-CCVKIWA
   WD 5  233-271    -GQ-CV--KSIYTFNA------VTS----------LCFIP---------------EGECVSL----LISDAGKLQVWS
   WD 6  275-311    -LE-NW--LSVNAHLD--A---VTT------------LQS---------------HGPLVFS----GSAE-GSVCVWE
   WD 7  330-365    -----V--TGCGKEDG--L---NGR----------LVLSP---------------RGDRVFL----SCGK-ASIRILN
   WD 8  366-412    WRTGVM--TRLANHSSTAG---VTD----------CVNQI---------------PGLLIASCFDLANGE-STINLFS
   WD 9  416-456    -CK-YL--VSLTSSDL--PRILCFA----------AWLTA---------------SGDHRWV-----TGG-HDLIVWE

   WD40 Template    TGE-CL--RTLSGHTS--G---VTS----------VSFSP---------------DGKRLVS----GSED-GTIKVWD