Input parameters:

  Query = ENSDARP00000110726 (Len=626)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000110726, Len=626):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MALTNTTITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVA 80  
WD40-rpts                  (________________WD 1_______________)   (_________________WD 2______

Query       81 GSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGK 160 
WD40-rpts      __________)   (_________________WD 3________________)   (_________________WD 4__

Query      161 WLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFN 240 
WD40-rpts      ______________)   (_________________WD 5________________)   (________________WD 

Query      241 PDGSCLYSGSENTLRVYGWEPDRCFDVVHVGWGKVSDLAISNNQMIAVSYSHTNVSWYVVDLNRVKKSGSVIQGLIQDKP 320 
WD40-rpts      6________________)   (________________WD 7________________)  (_________________W

Query      321 IPAPSSALGTTLRRNYERPTTSCTGQEMKQSSEADRRSPEGERRSPSSEDEKEDKESSAEITNPEDYKEIFQPRSVISRT 400 
WD40-rpts      D 8_________________)(_______________WD 9_______________)                       

Query      401 PPKTTEPFPAPLEHSFSESVLEKPGPVVKIVTPVIDRAGQLKGPITSSTPVQRVEPTVIAAAPRPVAVVTTSASSPSRPV 480 
WD40-rpts                                                                                      

Query      481 VNTTKPKPSTGIILSTRNEPIGLNAGDFLSHARNAKASAMGDEEALAQIRKGHDTMCVMLSSRSKNLDSVRSVWASGDVK 560 
WD40-rpts                                                                                      

Query      561 TSLDSAVSMNDLSIVVDVLNIINLKPSLWKLDLCTSILPQIEELLQSRYERNVQTICIKIKIIINR 626 
WD40-rpts                                                                        

9 WD40-repeats found in QUERY=ENSDARP00000110726 (Len=626):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    13-49       7.50  424.61  0.00012       27.5%     47.39
  WD 2:  Seg  6    53-91      10.27  538.74  3.4e-06       37.5%     54.63
  WD 3:  Seg 10    95-133     10.71  556.99  1.9e-06       47.5%     52.76
  WD 4:  Seg 14   137-175     10.67  555.25  2.0e-06       47.5%     54.21
  WD 5:  Seg 18   179-217     10.27  538.90  3.4e-06       42.5%     54.62
  WD 6:  Seg 22   221-258      7.95  442.97  6.7e-05       37.5%     54.24
  WD 7:  Seg 26   262-299      5.54  343.32  0.00147       15.0%     51.19
  WD 8:  Seg 30   302-341      7.96  443.33  6.6e-05        5.0%     30.71
  WD 9:  Seg 34   342-377      6.26  373.20  0.00058       20.0%     14.59

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   13-49     ----LQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWA
   WD 2   53-91     -PNCIMSLTGHTSAVGCIQFN-SSEERVVAGSLSGSLRLWD
   WD 3   95-133    -AKILRTLMGHKASISSLDFH-PMGEYLASGSVDSNIKLWD
   WD 4  137-175    -KGCVFRYKGHTQAVRCLAFS-PDGKWLASASDDSTVKLWD
   WD 5  179-217    -GKMITEFTSHTSAVNVVQFH-PNEYLLASGSADRTVKLWD
   WD 6  221-258    -FNMIGSSEGETGVVRSVLFN-PDGSCLYSGS-ENTLRVYG
   WD 7  262-299    -DRCFDVVHVGWGKVSDLAIS-NNQMIAVSYSHT-NVSWYV
   WD 8  302-341    LNRVKKSGSVIQGLIQDKPIP-APSSALGTTLRRNYERPTT
   WD 9  342-377    ----SCTGQEMKQSSEADRRS-PEGERRSPSSEDEKEDKES

   WD40 Template    TGECLRTLSGHTSGVTSVSFS-PDGKRLVSGSEDGTIKVWD