Input parameters:

  Query = ENSDARP00000110967 (Len=794)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000110967, Len=794):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEAERSGGMAGGTSQSPAGSGTGRNPNGPKAVLGPAPSAVAAAAAGPMAGSSQSRDQQDGDAGLSLPGILHFIQYEWSRF 80  
WD40-rpts                                                                                      

Query       81 QAEKYRWEAERDELRAQVAFLQGERKGQENMKQDLVRRIKMLEYALKQERAKHQKLKSGTDQSPGEKKPETEAEPIPNGP 160 
WD40-rpts                                                                                      

Query      161 ANSDSEPTNQMPWKEGRQLLRKSVCFLCIHSQKWLLSCVDPVCVIVIRYLEEVGYSDTILDMRSKRVRSLLGRNSPEANG 240 
WD40-rpts                                                                                      

Query      241 PPSSEPTTEPEPHVGVGGGGESLLVRQIEEQIKRRAGKESSKERMGSSVLDKIPFLRGCEDDDEDDSDEEEDFQGMTTDC 320 
WD40-rpts                                                                                      

Query      321 IDGRKNKKSRAKMGGEPMTTDLDPEDEDDEDDSEDALGEFDFLASGEEGEGAGEARISGDGRELGSENRRNKLQGIMSDF 400 
WD40-rpts                                           (_________________WD 1_________________)   

Query      401 PPKPTPPPSIPGQARSGEGGALGFSSDVFILDAVGGGDMNLGELADLTVANDNDLTIDLQDSREEFKKTWNPRFTLRSHF 480 
WD40-rpts                                      (_________________WD 2________________)(________

Query      481 DAIRALSFHPSQAVLLSASEDGTLKLWNLNKAMHSKKNAALDVEPIYTFRAHSGAVLSLAMGEEGESCFSGGLDGTIRGW 560 
WD40-rpts      ________WD 3_______________)                  (_______________WD 4______________

Query      561 KIPDLNVDPYDNYDPGVESSVLSGHEDAVWGLAFSSSLQRLASCSADGTVRIWDPHNSSPCVSVFNKEKEHGTPTSVAFV 640 
WD40-rpts      )              (_________________WD 5________________)       (_________________W

Query      641 NADPSQVVVSFDGGETLLYDLNTEQSIMVLETQTKDGSELINRVVSHPSQPISITAHENRTIRFLDNNTGKVIHSMVAHL 720 
WD40-rpts      D 6________________)   (___________________WD 7__________________)   (__________

Query      721 DAVTCLATDPKGTYLISGSHDCSVRLWMLDNRTCVQEITAHRKKHDEAIHDVAFHPSQPFIASAGADALAKIFV 794 
WD40-rpts      _______WD 8________________)(____________________WD 9____________________)

9 WD40-repeats found in QUERY=ENSDARP00000110967 (Len=794):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   358-397      5.65  347.89  0.00127       15.0%     24.81
  WD 2:  Seg  5   433-471      6.41  379.60  0.00048       12.5%     29.40
  WD 3:  Seg  8   472-508      9.38  502.16  1.1e-05       37.5%     46.19
  WD 4:  Seg 11   527-561      8.49  465.52  3.3e-05       30.0%     47.36
  WD 5:  Seg 14   576-614      9.29  498.28  1.2e-05       42.5%     53.03
  WD 6:  Seg 18   622-660      5.30  333.73  0.00198       12.5%     44.31
  WD 7:  Seg 22   664-706      6.53  384.53  0.00041       20.0%     54.94
  WD 8:  Seg 26   710-748      9.76  517.88  6.5e-06       30.0%     55.82
  WD 9:  Seg 30   749-794      6.66  389.67  0.00035       20.0%     45.72

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  358-397    GE------FDFLASGEEGEG----AGEARISGDGRELGSENRRNKLQGIM
   WD 2  433-471    -A------VGGGDMNLGELA----DLTVANDNDLTIDLQDSREEFKKTWN
   WD 3  472-508    ---------PRFTLRSHFDA----IRALSFHPSQAVLLSASEDGTLKLWN
   WD 4  527-561    -----------YTFRAHSGA----VLSLAMGEEGESCFSGGLDGTIRGWK
   WD 5  576-614    -G------VESSVLSGHEDA----VWGLAFSSSLQRLASCSADGTVRIWD
   WD 6  622-660    -V------SVFNKEKEHGTP----TSVAFVNADPSQVVVSFDGGETLLYD
   WD 7  664-706    -E------QSIMVLETQTKDGSELINRVVSHPSQPISITAHENRTIRFLD
   WD 8  710-748    -G------KVIHSMVAHLDA----VTCLATDPKGTYLISGSHDCSVRLWM
   WD 9  749-794    LDNRTCVQEITAHRKKHDEA----IHDVAFHPSQPFIASAGADALAKIFV

   WD40 Template    TG------ECLRTLSGHTSG----VTSVSFSPDGKRLVSGSEDGTIKVWD