Input parameters:

  Query = ENSDARP00000111131 (Len=431)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000111131, Len=431):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFRPKPTLKDRQHLYKLIISQLLYDGYTIIANSLISEVKPQNVVSPSEQLMQLAKIGMENDDSAVQYAIGRSDTVAPGVG 80  
WD40-rpts        (_________________WD 1_________________)              (________________WD 2___

Query       81 IDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPLEVMMNETAQQNM 160 
WD40-rpts      ____________)(___________________WD 3__________________)                        

Query      161 ENHPVIRTLYDHVDEVTCLSFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKHVQEAEMLRSISFHPSGDFLLVGTQHPT 240 
WD40-rpts        (_________________WD 4________________)     (_________________WD 5____________

Query      241 LRLYDVNTFQCFVSCNPLDQHTDTICGVCYNPSANSYVTCSKDGSIKLWDGVSNRCVTTFDKAHEGAEVCSAVFSKNSKY 320 
WD40-rpts      ____)(____________________WD 6___________________)   (__________________WD 7____

Query      321 ILSTGKDSVAKLWEISTGRTLVKYTGAGLSGRQTHRTQGVFNHTEDYVLLPDERTISLCCWDSRTAERKNLLSLGHNNIV 400 
WD40-rpts      _____________)   (____________________WD 8___________________)(_________________

Query      401 RCIVHSPTNPGFMTCSDDFRARFWYRRTTTD 431 
WD40-rpts      __WD 9__________________)      

9 WD40-repeats found in QUERY=ENSDARP00000111131 (Len=431):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     3-42       7.66  431.24  9.6e-05       12.5%     36.96
  WD 2:  Seg  3    57-93       3.28  250.11  0.02621       10.0%     32.83
  WD 3:  Seg  6    94-136      8.60  469.86  2.9e-05       25.0%     52.89
  WD 4:  Seg 10   163-201      9.78  518.63  6.4e-06       42.5%     56.08
  WD 5:  Seg 14   207-245      7.95  442.89  6.7e-05       22.5%     49.72
  WD 6:  Seg 18   246-290      9.19  494.26  1.4e-05       32.5%     42.76
  WD 7:  Seg 22   294-334      7.99  444.57  6.3e-05       30.0%     54.45
  WD 8:  Seg 26   338-382      6.84  397.31  0.00027       20.0%     52.82
  WD 9:  Seg 29   383-425      7.58  427.59  0.00011       20.0%     46.94

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    3-42     RPK-----P---TLKD----RQ------HLYK--LIISQLL-YDGYTIIAN-----SLISEVKPQN
   WD 2   57-93     ---------------------G------MEND--DSAVQYAIGRSDTVAPGVGIDLEFDADVQTMS
   WD 3   94-136    PEA-----SEYETCYV----TS------HKGP--CRVATYS-RDGQLIATG-----SADASIKILD
   WD 4  163-201    -HP-----V---IRTL----YD------HVDE--VTCLSFH-PTEQILASG-----SRDYTLKLFD
   WD 5  207-245    -AK-----R---AFKH----VQ------EAEM--LRSISFH-PSGDFLLVG-----TQHPTLRLYD
   WD 6  246-290    VNTFQCFVS---CNPL----DQ------HTDT--ICGVCYN-PSANSYVTC-----SKDGSIKLWD
   WD 7  294-334    -NR-----C---VTTF----DK------AHEGAEVCSAVFS-KNSKYILST-----GKDSVAKLWE
   WD 8  338-382    -GR-----T---LVKY----TGAGLSGRQTHR--TQGVFNH-TEDYVLLPD-----ERTISLCCWD
   WD 9  383-425    -SR-----T---AERKNLLSLG------HNNI--VRCIVHS-PTNPGFMTC-----SDDFRARFWY

   WD40 Template    TGE-----C---LRTL----SG------HTSG--VTSVSFS-PDGKRLVSG-----SEDGTIKVWD