Input parameters:

  Query = ENSDARP00000111140 (Len=398)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000111140, Len=398):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 CQMHKISPSSKFRHIQGSVLHRDTHITNLRGLHLTTPGECDGFCANGERVAVPLAIAGGQIAVFELSQPGKLPDTALPTI 80  
WD40-rpts                                                                              (_______

Query       81 QNSVNVADFCWDPFDPHRLVVAGDDAKIRVWQIPKGGLQETLTEPECVLRGHTEKIYSVKFHPHAIGLLVSSSYDLTVRL 160 
WD40-rpts      __________WD 1_________________)              (_______________WD 2______________

Query      161 WSLETGEQVKQLSGHQDQIFGMAWSPDGKLLATVCKDGKVRLYDPRKSTSPIQEGPGPEGQRGARVVWVCGGKFLMVSGF 240 
WD40-rpts      _)   (_________________WD 3________________)    (___________________WD 4________

Query      241 DSRSERQLYLFSAESLASGSLASAPADVSPSTLIPFYDPDTSVLILTGKGDTRVYIYEIVPEAPYFMECSSFNSSEPHKG 320 
WD40-rpts      ___________)      (_________________WD 5_________________)                      

Query      321 LCFLPKTECDVRDVEVARAVRLGKTTIEPVAFRVPRVKKEFFQDDVFPDTAVWWESSLSAAEWLSGSDGQHRKISLRP 398 
WD40-rpts                                                                                    

5 WD40-repeats found in QUERY=ENSDARP00000111140 (Len=398):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7    73-112      6.77  394.43  0.00030       25.0%     41.35
  WD 2:  Seg 10   127-162      7.01  404.18  0.00022       37.5%     48.45
  WD 3:  Seg 13   166-204      9.43  504.02  1.0e-05       37.5%     54.68
  WD 4:  Seg 17   209-252      3.18  245.88  0.02984       15.0%     46.98
  WD 5:  Seg 21   259-298      4.74  310.26  0.00409       15.0%     47.60

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   73-112    PDTALPTIQNSVN-VADFCWDPFDP-HRL-VVAGDDA----KIRVWQ
   WD 2  127-162    ----CVLRGHTEK-IYSVKFHP-HAIGLL-VSSSYDL----TVRLWS
   WD 3  166-204    GEQVKQLSGHQDQ-IFGMAWSP-DG-KLL-ATVCKDG----KVRLYD
   WD 4  209-252    TSPIQEGPGPEGQRGARVVWVC-GG-KFL-MVSGFDSRSERQLYLFS
   WD 5  259-298    GSLASAPADVSPS-TLIPFYDP-DT-SVLILTGKGDT----RVYIYE

   WD40 Template    GECLRTLSGHTSG-VTSVSFSP-DG-KRL-VSGSEDG----TIKVWD