Input parameters:

  Query = ENSDARP00000111859 (Len=337)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000111859, Len=337):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAVYFDHRAEAPDSSGVPVLISWHSSVCVLAVGSVNPSTGGCVDLYLQQGEHVELCHVERGFSPSLLQWHPNKPLLAVGW 80  
WD40-rpts           (__________________WD 1__________________)   (_________________WD 2________

Query       81 ETGETILLSHPSGEHTPLPNNTHTACITVLEWSSNGSRLVTGDQAGVMAVWKVDARGKLQGSPLIKHDYSRPLTCCIFRP 160 
WD40-rpts      ________)(___________________WD 3__________________)                            

Query      161 PPPAEDVAMLARAAVSGDENALDMFNWKKSSKGAAFALGSQEGLAFYISTADGSVYSVDEQVKSVPLLSVESAVHKMWYS 240 
WD40-rpts                          (_________________WD 4________________)(_________________WD 

Query      241 KRRSALAVVTDSLQLSQFSLGPEGFAQEISKVKLSGRGGPNADVVWTEGGLLITASGELHIRLWHVELDDHYALSLDESL 320 
WD40-rpts      5_________________)(____________________WD 6____________________)               

Query      321 GFEKGERLNCVSFCTSK 337 
WD40-rpts                       

6 WD40-repeats found in QUERY=ENSDARP00000111859 (Len=337):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2     6-47       5.15  327.34  0.00241       12.5%     40.08
  WD 2:  Seg  5    51-89       7.27  414.78  0.00016       12.5%     53.69
  WD 3:  Seg  9    90-132      8.71  474.60  2.5e-05       30.0%     46.15
  WD 4:  Seg 16   181-219      5.18  328.78  0.00231       15.0%     49.79
  WD 5:  Seg 20   220-259      7.29  415.97  0.00015       12.5%     56.69
  WD 6:  Seg 24   260-305      6.37  377.63  0.00051       25.0%     55.01

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    6-47     DH---R-------A--EAPDSSGVPVLISWHSSVCVLAVGSVNPSTGGCVDLYL
   WD 2   51-89     -E---H-------VELCHVERGFSPSLLQWHPNKPLLAVGW----ETGETILLS
   WD 3   90-132    HPSGEH-------TPLPNNTHTACITVLEWSSNGSRLVTGD----QAGVMAVWK
   WD 4  181-219    -A---L-------DMFNWKKSSKGAAFALGSQEGLAFYIST----ADGSVYSVD
   WD 5  220-259    EQ---V-------KSVPLLSVESAVHKMWYSKRRSALAVVT----DSLQLSQFS
   WD 6  260-305    LG---PEGFAQEISKVKLSGRGGPNADVVWT-EGGLLITAS----GELHIRLWH

   WD40 Template    TG---E-------CLRTLSGHTSGVTSVSFSPDGKRLVSGS----EDGTIKVWD