Input parameters:

  Query = ENSP00000006526 (Len=334)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000006526, Len=334):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFRWERSIPLRGSAAALCNNLSVLQLPARNLTYFGVVHGPSAQLLSAAPEGVPLAQRQLHAKEGAGVSPPLITQVHWCVL 80  
WD40-rpts                                  (_________________WD 1________________)(____________

Query       81 PFRVLLVLTSHRGIQMYESNGYTMVYWHALDSGDASPVQAVFARGIAASGHFICVGTWSGRVLVFDIPAKGPNIVLSEEL 160 
WD40-rpts      _WD 2____________)           (________________WD 3_______________)       (______

Query      161 AGHQMPITDIATEPAQGQDCVADMVTADDSGLLCVWRSGPEFTLLTRIPGFGVPCPSVQLWQGIIAAGYGNGQVHLYEAT 240 
WD40-rpts      _____________WD 4___________________)(__________________WD 5_________________)  

Query      241 TGNLHVQINAHARAICALDLASEVGKLLSAGEDTFVHIWKLSRNPESGYIEVEHCHGECVADTQLCGARFCDSSGNSFAV 320 
WD40-rpts       (_________________WD 6________________)                                        

Query      321 TGYDLAEIRRFSSV 334 
WD40-rpts                    

6 WD40-repeats found in QUERY=ENSP00000006526 (Len=334):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    29-67       5.87  357.11  0.00096       12.5%     34.88
  WD 2:  Seg  5    68-98       3.13  244.08  0.03152       17.5%     42.14
  WD 3:  Seg  9   110-146      7.66  431.14  9.6e-05       15.0%     36.88
  WD 4:  Seg 12   154-197      7.27  415.06  0.00016       22.5%     46.83
  WD 5:  Seg 16   198-238      6.44  380.68  0.00046       17.5%     56.11
  WD 6:  Seg 20   242-280      9.42  503.97  1.0e-05       17.5%     51.91

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   29-67     -R---NLTYFGVVHGPSAQLLSAAPEGVP-----LAQRQLHAKEGAGV
   WD 2   68-98     -----------SPPLITQVHWCVLPFRVL-----LVLTSHRG-IQMYE
   WD 3  110-146    ------LDSGDASPVQAVFARGIAASGHF-----ICVGTWSGRVLVFD
   WD 4  154-197    -I---VLSEELAGHQMPITDIATEPAQGQDCVADMVTADDSGLLCVWR
   WD 5  198-238    SGPEFTLLTRIPGFGVPCPSVQLWQG--I-----IAAGYGNGQVHLYE
   WD 6  242-280    -G---NLHVQINAHARAICALDLASEVGK-----LLSAGEDTFVHIWK

   WD40 Template    TG---ECLRTLSGHTSGVTSVSFSPDGKR-----LVSGSEDGTIKVWD