Input parameters:
Query = ENSP00000176195 (Len=121)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000176195, Len=121):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAPRPLLLLLLLLGGSAARPAPPRARRHSDGTFTSELSRLREGARLQRLLQGLVGKRSEQDAENSMAWTRLSAGLLCPSG 80
WD40-rpts (_______________________________________________WD 1____________________________
Query 81 SNMPILQAWMPLDGTWSPWLPPGPMVSEPAGAAAEGTLRPR 121
WD40-rpts ___________________)
1 WD40-repeats found in QUERY=ENSP00000176195 (Len=121):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-100 2.81 230.75 0.04730 25.0% -6.54
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-100 MAPRPLLLLLLLLGGSAARPAPPRARRHSDGTFTSELSRLREGARLQRLLQGLVGKRSEQDAENSMAWTRLSAGLLCPSGSNMPILQAWMPLDGTWSPWL
WD40 Template TGE-----------------CLRTLSGHTSGV-----------------------TSV----------SFSPDGKRLVSGSE----------DGTIKVWD