Input parameters:

  Query = ENSP00000221214 (Len=1391)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000221214, Len=1391):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAVEGSTITSRIKNLLRSPSIKLRRSKAGNRREDLSSKVTLEKVLGITVSGGRGLACDPRSGLVAYPAGCVVVLFNPRKH 80  
WD40-rpts                                        (__________________WD 1__________________)   (

Query       81 KQHHILNSSRKTITALAFSPDGKYLVTGESGHMPAVRVWDVAEHSQVAELQEHKYGVACVAFSPSAKYIVSVGYQHDMIV 160 
WD40-rpts      __________________WD 2_________________)   (__________________WD 3______________

Query      161 NVWAWKKNIVVASNKVSSRVTAVSFSEDCSYFVTAGNRHIKFWYLDDSKTSKVNATVPLLGRSGLLGELRNNLFTDVACG 240 
WD40-rpts      ___)  (________________WD 4________________)                                    

Query      241 RGKKADSTFCITSSGLLCEFSDRRLLDKWVELRVYPEVKDSNQACLPPSSFITCSSDNTIRLWNTESSGVHGSTLHRNIL 320 
WD40-rpts                          (___________________WD 5___________________)_______________W

Query      321 SSDLIKIIYVDGNTQALLDTELPGGDKADASLLDPRVGIRSVCVSPNGQHLASGDRMGTLRVHELQSLSEMLKVEAHDSE 400 
WD40-rpts      D 6________________)     (_________________WD 7________________)   (____________

Query      401 ILCLEYSKPDTGLKLLASASRDRLIHVLDAGREYSLQQTLDEHSSSITAVKFAASDGQVRMISCGADKSIYFRTAQKSGD 480 
WD40-rpts      ______WD 8__________________)(____________________WD 9___________________)    (_

Query      481 GVQFTRTHHVVRKTTLYDMDVEPSWKYTAIGCQDRNIRIFNISSGKQKKLFKGSQGEDGTLIKVQTDPSGIYIATSCSDK 560 
WD40-rpts      __________________WD10__________________)(____________________WD11______________

Query      561 NLSIFDFSSGECVATMFGHSEIVTGMKFSNDCKHLISVSGDSCIFVWRLSSEMTISMRQRLAELRQRQRGGKQQGPSSPQ 640 
WD40-rpts      _____)   (_________________WD12________________)                                

Query      641 RASGPNRHQAPSMLSPGPALSSDSDKEGEDEGTEEELPALPVLAKSTKKALASVPSPALPRSLSHWEMSRAQESVGFLDP 720 
WD40-rpts                                                                                      

Query      721 APAANPGPRRRGRWVQPGVELSVRSMLDLRQLETLAPSLQDPSQDSLAIIPSGPRKHGQEALETSLTSQNEKPPRPQASQ 800 
WD40-rpts                                                                                      

Query      801 PCSYPHIIRLLSQEEGVFAQDLEPAPIEDGIVYPEPSDNPTMDTSEFQVQAPARGTLGRVYPGSRSSEKHSPDSACSVDY 880 
WD40-rpts                                                                                      

Query      881 SSSCLSSPEHPTEDSESTEPLSVDGISSDLEEPAEGDEEEEEEEGGMGPYGLQEGSPQTPDQEQFLKQHFETLASGAAPG 960 
WD40-rpts                                                                                      

Query      961 APVQVPERSESRSISSRFLLQVQTRPLREPSPSSSSLALMSRPAQVPQASGEQPRGNGANPPGAPPEVEPSSGNPSPQQA 1040
WD40-rpts                                                                                      

Query     1041 ASVLLPRCRLNPDSSWAPKRVATASPFSGLQKAQSVHSLVPQERHEASLQAPSPGALLSREIEAQDGLGSLPPADGRPSR 1120
WD40-rpts                                                                                      

Query     1121 PHSYQNPTTSSMAKISRSISVGENLGLVAEPQAHAPIRVSPLSKLALPSRAHLVLDIPKPLPDRPTLAAFSPVTKGRAPG 1200
WD40-rpts                                                                                      

Query     1201 EAEKPGFPVGLGKAHSTTERWACLGEGTTPKPRTECQAHPGPSSPCAQQLPVSSLFQGPENLQPPPPEKTPNPMECTKPG 1280
WD40-rpts                                                                                      

Query     1281 AALSQDSEPAVSLEQCEQLVAELRGSVRQAVRLYHSVAGCKMPSAEQSRIAQLLRDTFSSVRQELEAVAGAVLSSPGSSP 1360
WD40-rpts                                                                                      

Query     1361 GAVGAEQTQALLEQYSELLLRAVERRMERKL 1391
WD40-rpts                                     

12 WD40-repeats found in QUERY=ENSP00000221214 (Len=1391):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    35-76       2.87  233.03  0.04413       10.0%     50.74
  WD 2:  Seg  7    80-120      6.64  389.12  0.00035       35.0%     56.68
  WD 3:  Seg 11   124-164      6.62  388.24  0.00036       35.0%     56.63
  WD 4:  Seg 15   167-204      5.00  321.07  0.00293       30.0%     51.61
  WD 5:  Seg 23   261-304      5.75  351.98  0.00112       20.0%     50.95
  WD 6:  Seg 26   302-340      3.91  276.10  0.01178       10.0%     30.47
  WD 7:  Seg 30   346-384      7.77  435.69  8.4e-05       32.5%     49.13
  WD 8:  Seg 33   388-429      6.59  386.71  0.00038       27.5%     56.15
  WD 9:  Seg 37   430-474      6.27  373.47  0.00058       30.0%     52.46
  WD10:  Seg 41   479-521      5.30  333.67  0.00198       17.5%     56.15
  WD11:  Seg 45   522-566      6.57  385.98  0.00039       15.0%     51.78
  WD12:  Seg 49   570-608      9.50  506.99  9.1e-06       47.5%     58.28

Multiple sequence alignment of 12 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   35-76     LS--SKVT---LEK----VLGIT----VSGGRGLACDPRS---G--LVAYPA---G--CVVVLFN
   WD 2   80-120    -H-----K---QHH----ILNSS----RKTITALAFSPDG---K--YLVTGE--SGHMPAVRVWD
   WD 3  124-164    -H-----S---QVA----ELQEH----KYGVACVAFSPSA---K--YIVSVGYQHD--MIVNVWA
   WD 4  167-204    -K-----N---IVV----ASNKV----SSRVTAVSFSEDC---S--YFVTAG---N--RHIKFWY
   WD 5  261-304    SD-----R---RLLDKWVELRVY----PEVKDSNQACLPP---S--SFITCS--SD--NTIRLWN
   WD 6  302-340    -L-----W---NTE----SSGVH----GSTLHRNILSSDL---I--KIIYVD--GN--TQALLDT
   WD 7  346-384    -D-----K---ADA----SLLDP----RVGIRSVCVSPNG---Q--HLASGD--RM--GTLRVHE
   WD 8  388-429    -L-----S---EML----KVEAH----DSEILCLEYSKPDTGLK--LLASAS--RD--RLIHVLD
   WD 9  430-474    AG-----REYSLQQ----TLDEH----SSSITAVKFAASD---GQVRMISCG--AD--KSIYFRT
   WD10  479-521    -G-----D---GVQ----FTRTHHVVRKTTLYDMDVEPSW---K--YTAIGC--QD--RNIRIFN
   WD11  522-566    ISSGKQKK---LFK----GSQGE----DGTLIKVQTDPSG---I--YIATSC--SD--KNLSIFD
   WD12  570-608    -G-----E---CVA----TMFGH----SEIVTGMKFSNDC---K--HLISVS--GD--SCIFVWR

   WD40 Template    TG-----E---CLR----TLSGH----TSGVTSVSFSPDG---K--RLVSGS--ED--GTIKVWD