Input parameters:

  Query = ENSP00000233055 (Len=410)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000233055, Len=410):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAAEIHSRPQSSRPVLLSKIEGHQDAVTAALLIPKEDGVITASEDRTIRVWLKRDSGQYWPSIYHTMASPCSAMAYHHDS 80  
WD40-rpts                  (_________________WD 1_________________)(___________________WD 2____

Query       81 RRIFVGQDNGAVMEFHVSEDFNKMNFIKTYPAHQNRVSAIIFSLATEWVISTGHDKCVSWMCTRSGNMLGRHFFTSWASC 160 
WD40-rpts      _______________)       (_________________WD 3________________)  (_______________

Query      161 LQYDFDTQYAFVGDYSGQITLLKLEQNTCSVITTLKGHEGSVACLWWDPIQRLLFSGASDNSIIMWDIGGRKGRTLLLQG 240 
WD40-rpts      __WD 4________________)     (_________________WD 5________________)(____________

Query      241 HHDKVQSLCYLQLTRQLVSCSSDGGIAVWNMDVSREEAPQWLESDSCQKCEQPFFWNIKQMWDTKTLGLRQHHCRKCGQA 320 
WD40-rpts      _______WD 6__________________)                                   (______________

Query      321 VCGKCSSKRSSYPVMGFEFQVRVCDSCYDSIKDEDRTSLATFHEGKHNISHMSMDIARGLMVTCGTDRIVKIWDMTPVVG 400 
WD40-rpts      ___WD 7_________________)          (_________________WD 8________________)      

Query      401 CSLATGFSPH 410 
WD40-rpts                

8 WD40-repeats found in QUERY=ENSP00000233055 (Len=410):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    13-52       9.10  490.65  1.5e-05       32.5%     53.84
  WD 2:  Seg  5    53-96       7.60  428.78  0.00010       12.5%     55.32
  WD 3:  Seg  9   104-142      8.36  460.16  3.9e-05       17.5%     52.73
  WD 4:  Seg 13   145-183      7.74  434.24  8.7e-05       15.0%     54.71
  WD 5:  Seg 17   189-227      9.43  504.40  9.9e-06       32.5%     55.73
  WD 6:  Seg 21   228-270      9.06  489.02  1.6e-05       37.5%     57.86
  WD 7:  Seg 28   306-345      6.59  387.05  0.00038       10.0%     35.54
  WD 8:  Seg 32   356-394      8.72  474.82  2.5e-05       20.0%     56.41

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   13-52     RPV----LLSKIEGHQDAVTAALLIPKEDGVITASEDRTIRVWL
   WD 2   53-96     KRDSGQYWPSIYHTMASPCSAMAYHHDSRRIFVGQDNGAVMEFH
   WD 3  104-142    -MN----FIKTYPAHQNRVSAIIFSLATEWVISTGHDKCVSWMC
   WD 4  145-183    -SG----NMLGRHFFTSWASCLQYDFDTQYAFVGDYSGQITLLK
   WD 5  189-227    -CS----VITTLKGHEGSVACLWWDPIQRLLFSGASDNSIIMWD
   WD 6  228-270    IGG-RKGRTLLLQGHHDKVQSLCYLQLTRQLVSCSSDGGIAVWN
   WD 7  306-345    TLG----LRQHHCRKCGQAVCGKCSSKRSSYPVMGFEFQVRVCD
   WD 8  356-394    -RT----SLATFHEGKHNISHMSMDIARGLMVTCGTDRIVKIWD

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD