Input parameters:
Query = ENSP00000239026 (Len=310)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000239026, Len=310):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFS 80
WD40-rpts (_____
Query 81 RLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLV 160
WD40-rpts ____________________WD 1_________________________)
Query 161 TANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLNLSKNFLDPKELMELLKSRDYEREIKGSREKVISDKDLELLLDR 240
WD40-rpts
Query 241 SDLIDQMNASGPIKEKMGIFKILENSEDSSPELETGFHHLGLTGPELISGDLPTSASQSAGITSVSHCVA 310
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000239026 (Len=310):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 75-130 2.90 234.25 0.04253 22.5% 28.25
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 75-130 RDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAAD-TVIIYD
WD40 Template TGECLRTLSGHTS-----------------GVTSVSFSPDGKRLVSGSEDGTIKVWD