Accession: ENSP00000251030 - WDRR: WD40 Repeat Recognition

Input parameters:

  Query = ENSP00000251030 (Len=1809)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000251030, Len=1809):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MQKDLLGQDVFLIGPPGPLRRSIAMQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILE 80  
WD40-rpts                                                                                      

Query       81 GLEKAERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKKELDSWKIVRVSENFRVIALGLPVPRYSGNPLDPP 160 
WD40-rpts                                                                                      

Query      161 LRSRFQARDIYYLPFKDQLKLLYSIGANVSAEKVSQLLSFATTLCSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHA 240 
WD40-rpts                                                                                      

Query      241 IQWLYPYSILLGHEGKMAVEGVLKRFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPC 320 
WD40-rpts                                                                                      

Query      321 ASDRFIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTARDLLQQRYTLPNGDTAW 400 
WD40-rpts                                                                                      

Query      401 RSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYDGSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSF 480 
WD40-rpts                                                                                      

Query      481 RIIALAEPPVIGSTAHQWLGPEFLTMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFTHKLRETQDPTAQSLAAS 560 
WD40-rpts                                                                                      

Query      561 LSTRQLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEKNLADATIEINTDDNLEPELKDYKCEVTSGTLRIGAV 640 
WD40-rpts                                                                                      

Query      641 SAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLVGNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTL 720 
WD40-rpts                                                                                      

Query      721 TLQPSVKDGLIVYEDSPLVKAVKLGHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPD 800 
WD40-rpts                                                                                      

Query      801 FRMIVLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPHSELEMLRQYGPNVPEPILQKLVAAFGELRSLADQGIINYPYS 880 
WD40-rpts                                                                                      

Query      881 TREVVNIVKHLQKFPTEGLSSVVRNVFDFDSYNNDMREILINTLHKYGIPIGAKPTSVQLAKELTLPEQTFMGYWTIGQA 960 
WD40-rpts                                                                                      

Query      961 RSGMQKLLCPVETHHIDIKGPALINIQEYPIERHEERSLNFTEECASWRIPLDEINIICDIATSHENEQNTLYVVTCNPA 1040
WD40-rpts                                                                                      

Query     1041 SLYFMNMTGKSGFFVDFFDIFPRTANGVWHPFVTVAPLGSPLKGQVVLHEQQSNVILLLDTTGRALHRLILPSEKFTSKK 1120
WD40-rpts                                                                                      

Query     1121 PFWWNKEEAETYKMCKEFSHKNWLVFYKEKGNSLTVLDVLEGRTHTISLPINLKTVFLVAEDKWLLVESKTNQKYLLTKP 1200
WD40-rpts                                   (_________________WD 1_________________)           

Query     1201 AHIESEGSGVCQLYVLKEEPPSTGFGVTQETEFSIPHKISSDQLSSEHLSSAVEQKIASPNRILSDEKNYATIVVGFPDL 1280
WD40-rpts                                                                                      

Query     1281 MSPSEVYSWKRPSSLHKRSGTDTSFYRGKKKRGTPKQSNCVTLLDTNQVVRILPPGEVPLKDIYPKDVTPPQTSGYIEVT 1360
WD40-rpts                                                                                      

Query     1361 DLQSKKLRYIPIPRSESLSPYTTWLSTISDTDALLAEWDKSGVVTVDMGGHIRLWETGLERLQRSLMEWRNMIGQDDRNM 1440
WD40-rpts                                                                                      

Query     1441 QITINRDSGEDVSSPKHGKEDPDNMPHVGGNTWAGGTGGRDTAGLGGKGGPYRLDAGHTVYQVSQAEKDAVPEEVKRAAR 1520
WD40-rpts                                                                                      

Query     1521 EMGQRAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRIILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYK 1600
WD40-rpts                                                                                      

Query     1601 RRGELEPQLGSPQQKPKRLRLVVDVSGSMYRFNRMDGRLERTMEAVCMVMEAFENYEEKFQYDIVGHSGDGYNIGLVPMN 1680
WD40-rpts                                                           (__________________________

Query     1681 KIPKDNKQRLEILKTMHAHSQFCMSGDHTLEGTEHAIKEIVKEEADEYFVIVLSDANLSRYGIHPAKFAQILTRDPQVNA 1760
WD40-rpts      ____________WD 2______________________________________)                         

Query     1761 FAIFIGSLGDQATRLQRTLPAGRSFVAMDTKDIPQILQQIFTSTMLSSV 1809
WD40-rpts

2 WD40-repeats found in QUERY=ENSP00000251030 (Len=1809):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 33  1150-1189     3.14  244.52  0.03110       20.0%     41.72
  WD 2:  Seg 48  1654-1735     3.34  252.54  0.02433       22.5%     13.76

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1150-1189   KG---NSLTVLDVLEGRTHTISLPINLKTVFLV------------------AEDKW---------------------LLVES
   WD 2 1654-1735   ENYEEKFQYDIVGHSGDGYNIGLVPMNKIPKDNKQRLEILKTMHAHSQFCMSGDHTLEGTEHAIKEIVKEEADEYFVIVLSD

   WD40 Template    TG---ECLRTLSGHTSGVTSVSFSPDGKRLVSG------------------SEDGT---------------------IKVWD