Input parameters:
Query = ENSP00000251074 (Len=326)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000251074, Len=326):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MKQDASRNAAYTVDCEDYVHVVEFNPFENGDSGNLIAYGGNNYVVIGTCTFQEEEADVEGIQYKTLRTFHHGVRVDGIAW 80
WD40-rpts (____________________WD 1___________________) (____________________
Query 81 SPETRLDSLPPVIKFCTSAADMKIRLFTSDLQDKNEYKVLEGHTDFINGLVFDPKEGQEIASVSDDHTCRIWNLEGVQTA 160
WD40-rpts __WD 2_____________________) (_________________WD 3_________________) (____
Query 161 HFVLHSPGMSVCWHPEETFKLMVAEKNGTIRFYDLLAQQAILSLESEQVPLMSAHWCLKNTFKVGAVAGNDWLIWDITRS 240
WD40-rpts _____________WD 4________________) (_________________WD 5________________)
Query 241 SYPQNKRPVHMDRACLFRWSTISENLFATTGYPGKMASQFQIHHLGHPQPILMGSVAVGSGLSWHRTLPLCVIGGDHKLL 320
WD40-rpts (________________WD 6________________) (________________WD 7______________
Query 321 FWVTEV 326
WD40-rpts __)
7 WD40-repeats found in QUERY=ENSP00000251074 (Len=326):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 5-49 5.71 350.40 0.00118 15.0% 48.59
WD 2: Seg 6 60-108 6.05 364.75 0.00076 15.0% 51.74
WD 3: Seg 10 114-153 8.81 478.71 2.2e-05 30.0% 54.37
WD 4: Seg 14 156-194 8.50 465.83 3.3e-05 20.0% 54.29
WD 5: Seg 18 198-236 8.37 460.47 3.9e-05 12.5% 56.85
WD 6: Seg 22 244-281 4.96 319.38 0.00309 10.0% 43.52
WD 7: Seg 25 286-323 6.13 367.82 0.00069 17.5% 49.60
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 5-49 ASRNAA-YTVDCEDYVHVVEFNPFENGDSGN--------LI--AYGGNNYVVIGTC
WD 2 60-108 GIQYKTLRTFHHGVRVDGIAWSP-----ETRLDSLPPVIKF--CTSAADMKIRLFT
WD 3 114-153 -KNEYK-VLEGHTDFINGLVFDP----KEGQ--------EI--ASVSDDHTCRIWN
WD 4 156-194 -GVQTA-HFVLHSPGMSVCWHPE-----ETF--------KL--MVAEKNGTIRFYD
WD 5 198-236 -QQAIL-SLESEQVPLMSAHWCL-----KNT--------FK--VGAVAGNDWLIWD
WD 6 244-281 ----QN-KRPVHMDRACLFRWST-----ISE--------NLFATTGYPGKMASQFQ
WD 7 286-323 -GHPQP-ILMGSVAVGSGLSWHR-----TLP---------L--CVIGGDHKLLFWV
WD40 Template TGECLR-TLSGHTSGVTSVSFSP-----DGK--------RL--VSGSEDGTIKVWD