Input parameters:
Query = ENSP00000251076 (Len=3036)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000251076, Len=3036):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MHLHQVLTGAVNPGDNCYSVGSVGDVPFTAYGSGCDIVILANDFECVQIIPGAKHGNIQVSCVECSNQQGRIAASYGNAV 80
WD40-rpts
Query 81 CIFEPLGINSHKRNCQLKCQWLKTGQFFLSSVTYNLAWDPQDNRLLTATDSIQLWAPPGDDILEEEEEIDNTVPPVLNDW 160
WD40-rpts (____________
Query 161 KCVWQCKTSVSVHLMEWSPDGEYFATAGKDDCLLKVWYPMTGWKSSIIPQDHHEVKRRQSSTQFSFVYLAHPRAVTGFSW 240
WD40-rpts ___________WD 1______________________)
Query 241 RKTSKYMPRGSVCNVLLTSCHDGVCRLWAETLLPEDCLLGEQICETTTSSIASSLSHAGRHKDRIQHALETIHHLKNLRK 320
WD40-rpts
Query 321 GQRRSSVLVTHAELMPDQTAMHEVQRHISHHANALCHFHIAASINPATDIPNVLVGTAFNVDDGNGGFVVHWLNNKEFHF 400
WD40-rpts
Query 401 TSSTEVFMHQLRKLSDKQVDHENDDADREDEEHSQEDRERGLHMKLDHDLSLDRESEAGTGSSEHEDGEREGSPRTYSRL 480
WD40-rpts
Query 481 SVPMPLPTVLLDRKIETLLTEWNKNPDMLFTIHPVDGTFLVWHVKYLDEYNPGIFRQVQVSFSSRIPVAFPSGDASSLSK 560
WD40-rpts
Query 561 NIMMYACINATKDSHHTLLHQEGMSVGSPHGSQPHSRSHSTHMNILAPTVMMISKHIDGSLNQWAVTFADKSAFTTVLTV 640
WD40-rpts
Query 641 SHKFRYCGHRFHLNDLACHSVLPLLLTSSHHNALLTPELDCQWDSDNKLSRLMDPVKHIKGSSKQPLRNAATRTFHDPNA 720
WD40-rpts
Query 721 IYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTYCNSASACFVASDGKNLRLYQAVVDAR 800
WD40-rpts
Query 801 KLLDELSDPESSKLIGEVFNIVSQQSTARPGCIIELDAITNQCGSNTQLLHVFQEDFIIGYKPHKEDMEKKETEIFFQPS 880
WD40-rpts
Query 881 QGYRPPPFSEKFFLVVIEKDSNNNSILHMWHLHLKSVQACLAKASEGASSESLLSVPGQKNVDSSPETSPSVSPMPHSSS 960
WD40-rpts
Query 961 IANLQTASKLILSSRLVYSQPLDLPESVEVIRATPSAGHLSSSSIYPVCLAPYLVVTTCSDNKVRFWKCCMEANPECNKS 1040
WD40-rpts (_______________WD 2_______________)
Query 1041 DEKEIYHWKRWPLMNDEGEDNSSTVSIVGRPVAVSCSYTGRLAVAYKQPIHHNGFVSKEFSMHVCIFECESTGGSEWVLE 1120
WD40-rpts
Query 1121 QTIHLDDLVKVGSVLDSRVSVDSNLFVYSKSDALLSKDRYLIPNIKHLVHLDWVSKEDGSHILTVGVGANIFMYGRLSGI 1200
WD40-rpts
Query 1201 VTEQTNSKDGVAVITLPLGGSIKQGVKSRWVLLRSIDLVSSVDGTPSLPVSLSWVRDGILVVGMDCEMHVYAQWKHAVKF 1280
WD40-rpts
Query 1281 GDTEADSSNAEEAAMQDHSTFKSNMLARKSVVEGTAISDDVFCSPTVIQDGGLFEAAHVLSPTLPQYHPTQLLELMDLGK 1360
WD40-rpts
Query 1361 VRRAKAILSHLVKCIAGEVAIVRDPDAGEGTKRHLSRTISVSGSTAKETVTVGKDGTRDYTEIDSIPPLPLYALLAADQD 1440
WD40-rpts
Query 1441 TSYRISEESTKIPQSYEDQTVSQPEDQYSELFQIQDIPTDDIDLEPEKRENKSKVINLSQYGPAYFGQEHARVLSSHLMH 1520
WD40-rpts
Query 1521 SSLPGLTRLEQMFLVALADTVATTSTELDESRDKSCSGRDTLDECGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGVSTCH 1600
WD40-rpts
Query 1601 FAWAFHSEAEEELINMIPAIQRGDPQWSELRAMGIGWWVRNINTLRRCIEKVAKASFQRNNDALDAALFYLSMKKKAVVW 1680
WD40-rpts
Query 1681 GLFRSQHDEKMTTFFSHNFNEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMEDIQLAMVIARLYES 1760
WD40-rpts
Query 1761 EFETSSTYISILNQKILGCQKDGSGFSCKRLHPDPFLRSLAYWVMKDYTRALDTLLEQTPKEDDEHQVIIKSCNPVAFSF 1840
WD40-rpts
Query 1841 YNYLRTHPLLIRRNLASPEGTLATLGLKTEKNFVDKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKTSALSAK 1920
WD40-rpts
Query 1921 KDQPDFISHRMDDVPSHSKALSDGNGSSGIEWSNVTSSQYDWSQPIVKVDEEPLNLDWGEDHDSALDEEEDDAVGLVMKS 2000
WD40-rpts
Query 2001 TDAREKDKQSDQKASDPNMLLTPQEEDDPEGDTEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKE 2080
WD40-rpts
Query 2081 IAALHEICNHESVIKEYSSKTYSKVESDLLDQEEMVDKPDIGSYERHQIERRRLQAKREHAERRKSWLQKNQDLLRVFLS 2160
WD40-rpts
Query 2161 YCSLHGAQGGGLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTKTVIANPVLYLNNHIHDILYTIVQM 2240
WD40-rpts
Query 2241 KTPPHPSIEDVKVHTLHSLAASLSASIYQALCDSHSYSQTEGNQFTGMAYQGLLLSDRRRLRTESIEEHATPNSSPAQWP 2320
WD40-rpts
Query 2321 GVSSLINLLSSAQDEDQPKLNILLCEAVVAVYLSLLIHALATNSSSELFRLAAHPLNNRMWAAVFGGGVKLVVKPRRQSE 2400
WD40-rpts
Query 2401 NISAPPVLSEDIDKHRRRFNMRMLVPGRPVKDATPPPVPAERPSYKEKFIPPELSMWDYFVAKPFLPLSDSGVIYDSDES 2480
WD40-rpts
Query 2481 IHSDEEDDAFFSDTQIQEHQDPNSYSWALLHLTMVKLALHNVKNFFPIAGLEFSELPVTSPLGIAVIKNLENWEQILQEK 2560
WD40-rpts
Query 2561 MDQFEGPPPNYINTYPTDLSVGAGPAILRNKAMLEPENTPFKSRDSSAFPVKRLWHFLVKQEVLQETFIRYIFTKKRKQS 2640
WD40-rpts
Query 2641 EVEADLGYPGGKAKVIHKESDMIMAFSVNKANCNEIVLASTHDVQELDVTSLLACQSYIWIGEEYDRESKSSDDVDYRGS 2720
WD40-rpts
Query 2721 TTTLYQPSATSYSASQVHPPSSLPWLGTGQTSTGASVLMKRNLHNVKRMTSHPVHQYYLTGAQDGSVRMFEWTRPQQLVC 2800
WD40-rpts (_______________WD 3_______________)(________
Query 2801 FRQAGNARVTRLYFNSQGNKCGVADGEGFLSIWQVNQTASNPKPYMSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVC 2880
WD40-rpts ___________WD 4__________________)(______________________WD 5___________________
Query 2881 LWDTLISPGNSLIHGFTCHDHGATVLQYAPKQQLLISGGRKGHVCIFDIRQRQLIHTFQAHDSAIKALALDPYEEYFTTG 2960
WD40-rpts __) (_________________WD 6________________) (_________________WD 7_______
Query 2961 SAEGNIKVWRLTGHGLIHSFKSEHAKQSIFRNIGAGVMQIDIIQGNRLFSCGADGTLKTRVLPNAFNIPNRILDIL 3036
WD40-rpts _________)
7 WD40-repeats found in QUERY=ENSP00000251076 (Len=3036):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 12 148-198 3.99 279.46 0.01062 25.0% 20.45
WD 2: Seg 39 993-1028 3.15 244.64 0.03099 15.0% 21.44
WD 3: Seg 71 2756-2791 4.69 308.39 0.00434 12.5% 46.49
WD 4: Seg 74 2792-2834 4.98 320.46 0.00299 15.0% 57.17
WD 5: Seg 78 2835-2883 3.67 266.35 0.01591 10.0% 49.77
WD 6: Seg 82 2890-2928 6.44 380.65 0.00046 22.5% 50.13
WD 7: Seg 86 2932-2970 7.36 418.84 0.00014 27.5% 50.63
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 148-198 EI------DNTVPPVLNDWKCVWQCKTSVSVHLMEWSPDGEYFATAGK---DDCLLKVWY
WD 2 993-1028 ----------ATPSA----------GHLSSSSIYPVCLAPYLVVT-TC---SDNKVRFWK
WD 3 2756-2791 S----------VLMK----------RNLHNVKRMTSHPVHQYYLT-GA---QDGSVRMFE
WD 4 2792-2834 WT---RPQQLVCFRQ----------AGNARVTRLYFNSQGNKCGV-AD---GEGFLSIWQ
WD 5 2835-2883 VNQTASNPKPYMSWQ----------CHSKATSDFAFITSSSLVAT-SGHSNDNRNVCLWD
WD 6 2890-2928 -N------SLIHGFT----------CHDHGATVLQYAPKQQLLIS-GG---RKGHVCIFD
WD 7 2932-2970 -R------QLIHTFQ----------AHDSAIKALALDPYEEYFTT-GS---AEGNIKVWR
WD40 Template TG------ECLRTLS----------GHTSGVTSVSFSPDGKRLVS-GS---EDGTIKVWD