WDRR: WD40 Repeat Recognition
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Pre-calculated Results - Accession: ENSP00000251076    [Homo sapiens]

[Download result as txt]    [Query sequence in FASTA]
Input parameters:
  Query = ENSP00000251076 (Len=3036)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000251076, Len=3036):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MHLHQVLTGAVNPGDNCYSVGSVGDVPFTAYGSGCDIVILANDFECVQIIPGAKHGNIQVSCVECSNQQGRIAASYGNAV 80  
WD40-rpts                                                                                      

Query       81 CIFEPLGINSHKRNCQLKCQWLKTGQFFLSSVTYNLAWDPQDNRLLTATDSIQLWAPPGDDILEEEEEIDNTVPPVLNDW 160 
WD40-rpts                                                                         (____________

Query      161 KCVWQCKTSVSVHLMEWSPDGEYFATAGKDDCLLKVWYPMTGWKSSIIPQDHHEVKRRQSSTQFSFVYLAHPRAVTGFSW 240 
WD40-rpts      ___________WD 1______________________)                                          

Query      241 RKTSKYMPRGSVCNVLLTSCHDGVCRLWAETLLPEDCLLGEQICETTTSSIASSLSHAGRHKDRIQHALETIHHLKNLRK 320 
WD40-rpts                                                                                      

Query      321 GQRRSSVLVTHAELMPDQTAMHEVQRHISHHANALCHFHIAASINPATDIPNVLVGTAFNVDDGNGGFVVHWLNNKEFHF 400 
WD40-rpts                                                                                      

Query      401 TSSTEVFMHQLRKLSDKQVDHENDDADREDEEHSQEDRERGLHMKLDHDLSLDRESEAGTGSSEHEDGEREGSPRTYSRL 480 
WD40-rpts                                                                                      

Query      481 SVPMPLPTVLLDRKIETLLTEWNKNPDMLFTIHPVDGTFLVWHVKYLDEYNPGIFRQVQVSFSSRIPVAFPSGDASSLSK 560 
WD40-rpts                                                                                      

Query      561 NIMMYACINATKDSHHTLLHQEGMSVGSPHGSQPHSRSHSTHMNILAPTVMMISKHIDGSLNQWAVTFADKSAFTTVLTV 640 
WD40-rpts                                                                                      

Query      641 SHKFRYCGHRFHLNDLACHSVLPLLLTSSHHNALLTPELDCQWDSDNKLSRLMDPVKHIKGSSKQPLRNAATRTFHDPNA 720 
WD40-rpts                                                                                      

Query      721 IYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTYCNSASACFVASDGKNLRLYQAVVDAR 800 
WD40-rpts                                                                                      

Query      801 KLLDELSDPESSKLIGEVFNIVSQQSTARPGCIIELDAITNQCGSNTQLLHVFQEDFIIGYKPHKEDMEKKETEIFFQPS 880 
WD40-rpts                                                                                      

Query      881 QGYRPPPFSEKFFLVVIEKDSNNNSILHMWHLHLKSVQACLAKASEGASSESLLSVPGQKNVDSSPETSPSVSPMPHSSS 960 
WD40-rpts                                                                                      

Query      961 IANLQTASKLILSSRLVYSQPLDLPESVEVIRATPSAGHLSSSSIYPVCLAPYLVVTTCSDNKVRFWKCCMEANPECNKS 1040
WD40-rpts                                      (_______________WD 2_______________)            

Query     1041 DEKEIYHWKRWPLMNDEGEDNSSTVSIVGRPVAVSCSYTGRLAVAYKQPIHHNGFVSKEFSMHVCIFECESTGGSEWVLE 1120
WD40-rpts                                                                                      

Query     1121 QTIHLDDLVKVGSVLDSRVSVDSNLFVYSKSDALLSKDRYLIPNIKHLVHLDWVSKEDGSHILTVGVGANIFMYGRLSGI 1200
WD40-rpts                                                                                      

Query     1201 VTEQTNSKDGVAVITLPLGGSIKQGVKSRWVLLRSIDLVSSVDGTPSLPVSLSWVRDGILVVGMDCEMHVYAQWKHAVKF 1280
WD40-rpts                                                                                      

Query     1281 GDTEADSSNAEEAAMQDHSTFKSNMLARKSVVEGTAISDDVFCSPTVIQDGGLFEAAHVLSPTLPQYHPTQLLELMDLGK 1360
WD40-rpts                                                                                      

Query     1361 VRRAKAILSHLVKCIAGEVAIVRDPDAGEGTKRHLSRTISVSGSTAKETVTVGKDGTRDYTEIDSIPPLPLYALLAADQD 1440
WD40-rpts                                                                                      

Query     1441 TSYRISEESTKIPQSYEDQTVSQPEDQYSELFQIQDIPTDDIDLEPEKRENKSKVINLSQYGPAYFGQEHARVLSSHLMH 1520
WD40-rpts                                                                                      

Query     1521 SSLPGLTRLEQMFLVALADTVATTSTELDESRDKSCSGRDTLDECGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGVSTCH 1600
WD40-rpts                                                                                      

Query     1601 FAWAFHSEAEEELINMIPAIQRGDPQWSELRAMGIGWWVRNINTLRRCIEKVAKASFQRNNDALDAALFYLSMKKKAVVW 1680
WD40-rpts                                                                                      

Query     1681 GLFRSQHDEKMTTFFSHNFNEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMEDIQLAMVIARLYES 1760
WD40-rpts                                                                                      

Query     1761 EFETSSTYISILNQKILGCQKDGSGFSCKRLHPDPFLRSLAYWVMKDYTRALDTLLEQTPKEDDEHQVIIKSCNPVAFSF 1840
WD40-rpts                                                                                      

Query     1841 YNYLRTHPLLIRRNLASPEGTLATLGLKTEKNFVDKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKTSALSAK 1920
WD40-rpts                                                                                      

Query     1921 KDQPDFISHRMDDVPSHSKALSDGNGSSGIEWSNVTSSQYDWSQPIVKVDEEPLNLDWGEDHDSALDEEEDDAVGLVMKS 2000
WD40-rpts                                                                                      

Query     2001 TDAREKDKQSDQKASDPNMLLTPQEEDDPEGDTEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKE 2080
WD40-rpts                                                                                      

Query     2081 IAALHEICNHESVIKEYSSKTYSKVESDLLDQEEMVDKPDIGSYERHQIERRRLQAKREHAERRKSWLQKNQDLLRVFLS 2160
WD40-rpts                                                                                      

Query     2161 YCSLHGAQGGGLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTKTVIANPVLYLNNHIHDILYTIVQM 2240
WD40-rpts                                                                                      

Query     2241 KTPPHPSIEDVKVHTLHSLAASLSASIYQALCDSHSYSQTEGNQFTGMAYQGLLLSDRRRLRTESIEEHATPNSSPAQWP 2320
WD40-rpts                                                                                      

Query     2321 GVSSLINLLSSAQDEDQPKLNILLCEAVVAVYLSLLIHALATNSSSELFRLAAHPLNNRMWAAVFGGGVKLVVKPRRQSE 2400
WD40-rpts                                                                                      

Query     2401 NISAPPVLSEDIDKHRRRFNMRMLVPGRPVKDATPPPVPAERPSYKEKFIPPELSMWDYFVAKPFLPLSDSGVIYDSDES 2480
WD40-rpts                                                                                      

Query     2481 IHSDEEDDAFFSDTQIQEHQDPNSYSWALLHLTMVKLALHNVKNFFPIAGLEFSELPVTSPLGIAVIKNLENWEQILQEK 2560
WD40-rpts                                                                                      

Query     2561 MDQFEGPPPNYINTYPTDLSVGAGPAILRNKAMLEPENTPFKSRDSSAFPVKRLWHFLVKQEVLQETFIRYIFTKKRKQS 2640
WD40-rpts                                                                                      

Query     2641 EVEADLGYPGGKAKVIHKESDMIMAFSVNKANCNEIVLASTHDVQELDVTSLLACQSYIWIGEEYDRESKSSDDVDYRGS 2720
WD40-rpts                                                                                      

Query     2721 TTTLYQPSATSYSASQVHPPSSLPWLGTGQTSTGASVLMKRNLHNVKRMTSHPVHQYYLTGAQDGSVRMFEWTRPQQLVC 2800
WD40-rpts                                         (_______________WD 3_______________)(________

Query     2801 FRQAGNARVTRLYFNSQGNKCGVADGEGFLSIWQVNQTASNPKPYMSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVC 2880
WD40-rpts      ___________WD 4__________________)(______________________WD 5___________________

Query     2881 LWDTLISPGNSLIHGFTCHDHGATVLQYAPKQQLLISGGRKGHVCIFDIRQRQLIHTFQAHDSAIKALALDPYEEYFTTG 2960
WD40-rpts      __)      (_________________WD 6________________)   (_________________WD 7_______

Query     2961 SAEGNIKVWRLTGHGLIHSFKSEHAKQSIFRNIGAGVMQIDIIQGNRLFSCGADGTLKTRVLPNAFNIPNRILDIL 3036
WD40-rpts      _________)                                                                  



7 WD40-repeats found in QUERY=ENSP00000251076 (Len=3036):
(Red - Z-score>4.0)
  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 12   148-198      3.99  279.46  0.01062       25.0%     20.45
  WD 2:  Seg 39   993-1028     3.15  244.64  0.03099       15.0%     21.44
  WD 3:  Seg 71  2756-2791     4.69  308.39  0.00434       12.5%     46.49
  WD 4:  Seg 74  2792-2834     4.98  320.46  0.00299       15.0%     57.17
  WD 5:  Seg 78  2835-2883     3.67  266.35  0.01591       10.0%     49.77
  WD 6:  Seg 82  2890-2928     6.44  380.65  0.00046       22.5%     50.13
  WD 7:  Seg 86  2932-2970     7.36  418.84  0.00014       27.5%     50.63
Multiple sequence alignment of 7 WD40-repeats:
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
   WD 1  148-198    EI------DNTVPPVLNDWKCVWQCKTSVSVHLMEWSPDGEYFATAGK---DDCLLKVWY
   WD 2  993-1028   ----------ATPSA----------GHLSSSSIYPVCLAPYLVVT-TC---SDNKVRFWK
   WD 3 2756-2791   S----------VLMK----------RNLHNVKRMTSHPVHQYYLT-GA---QDGSVRMFE
   WD 4 2792-2834   WT---RPQQLVCFRQ----------AGNARVTRLYFNSQGNKCGV-AD---GEGFLSIWQ
   WD 5 2835-2883   VNQTASNPKPYMSWQ----------CHSKATSDFAFITSSSLVAT-SGHSNDNRNVCLWD
   WD 6 2890-2928   -N------SLIHGFT----------CHDHGATVLQYAPKQQLLIS-GG---RKGHVCIFD
   WD 7 2932-2970   -R------QLIHTFQ----------AHDSAIKALALDPYEEYFTT-GS---AEGNIKVWR

   WD40 Template    TG------ECLRTLS----------GHTSGVTSVSFSPDGKRLVS-GS---EDGTIKVWD


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Last modified: 09 Jan 2019