Input parameters:
Query = ENSP00000251166 (Len=925)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000251166, Len=925):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MNRFRVSKFRHTEARPPRRESWISDIRAGTAPSCRNHIKSSCSLIAFNSDRPGVLGIVPLQGQGEDKRRVAHLGCHSDLV 80
WD40-rpts (_________________
Query 81 TDLDFSPFDDFLLATGSADRTVKLWRLPGPGQALPSAPGVVLGPEDLPVEVLQFHPTSDGILVSAAGTTVKVWDAAKQQP 160
WD40-rpts __WD 1___________________) (_________________WD 2________________) (__
Query 161 LTELAAHGDLVQSAVWSRDGALVGTACKDKQLRIFDPRTKPRASQSTQAHENSRDSRLAWMGTWEHLVSTGFNQMREREV 240
WD40-rpts _______________WD 3________________) (___________________WD 4________________
Query 241 KLWDTRFFSSALASLTLDTSLGCLVPLLDPDSGLLVLAGKGERQLYCYEVVPQQPALSPVTQCVLESVLRGAALVPRQAL 320
WD40-rpts ___) (_________________WD 5________________) (__
Query 321 AVMSCEVLRVLQLSDTAIVPIGYHVPRKAVEFHEDLFPDTAGCVPATDPHSWWAGDNQQVQKVSLNPACRPHPSFTSCLV 400
WD40-rpts ________________WD 6_________________) (__________________WD 7___________
Query 401 PPAEPLPDTAQPAVMETPVGDADASEGFSSPPSSLTSPSTPSSLGPSLSSTSGIGTSPSLRSLQSLLGPSSKFRHAQGTV 480
WD40-rpts _______)
Query 481 LHRDSHITNLKGLNLTTPGESDGFCANKLRVAVPLLSSGGQVAVLELRKPGRLPDTALPTLQNGAAVTDLAWDPFDPHRL 560
WD40-rpts (_____________________WD 8____________________)(___________________WD 9_______
Query 561 AVAGEDARIRLWRVPAEGLEEVLTTPETVLTGHTEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQDQI 640
WD40-rpts ____________) (_________________WD10_________________) (_____________
Query 641 FSLAWSPDGQQLATVCKDGRVRVYRPRSGPEPLQEGPGPKGGRGARIVWVCDGRCLLVSGFDSQSERQLLLYEAEALAGG 720
WD40-rpts ____WD11________________) (___________________WD12___________________) (
Query 721 PLAVLGLDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLYELLPESPFFLECNSFTSPDPHKGLVLLPKTECDVREVELMRC 800
WD40-rpts _________________WD13_________________) (_____
Query 801 LRLRQSSLEPVAFRLPRVRKEFFQDDVFPDTAVIWEPVLSAEAWLQGANGQPWLLSLQPPDMSPVSQAPREAPARRAPSS 880
WD40-rpts _____________WD14__________________)
Query 881 AQYLEEKSDQQKKEELLNAMVAKLGNREDPLPQDSFEGVDEDEWD 925
WD40-rpts
14 WD40-repeats found in QUERY=ENSP00000251166 (Len=925):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 5 63-106 8.00 445.18 6.2e-05 42.5% 51.22
WD 2: Seg 9 116-154 7.27 414.85 0.00016 22.5% 45.21
WD 3: Seg 12 158-196 8.45 463.68 3.5e-05 25.0% 55.57
WD 4: Seg 16 201-244 4.55 302.77 0.00516 20.0% 38.30
WD 5: Seg 19 251-289 5.98 361.50 0.00084 10.0% 48.06
WD 6: Seg 26 318-358 4.50 300.61 0.00552 5.0% 14.28
WD 7: Seg 28 367-408 3.12 243.34 0.03224 17.5% -2.07
WD 8: Seg 31 483-529 6.10 366.84 0.00071 15.0% 15.04
WD 9: Seg 35 530-573 7.28 415.44 0.00016 27.5% 46.79
WD10: Seg 38 584-623 7.39 419.93 0.00014 35.0% 51.32
WD11: Seg 42 627-665 9.22 495.57 1.3e-05 32.5% 56.78
WD12: Seg 46 670-713 4.00 280.01 0.01044 20.0% 48.23
WD13: Seg 50 720-759 5.25 331.44 0.00212 20.0% 53.16
WD14: Seg 55 795-836 2.87 233.33 0.04373 20.0% 29.49
Multiple sequence alignment of 14 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 63-106 QG---EDKRRVA-------HLGC-HSDL-VTD-LDFS---PFD-DFLLAT---G----SADR----TVKLWR
WD 2 116-154 -S---A---PGV-------VLGP-EDLP-VEV-LQFH---P-T-SDGILV---S----AAGT----TVKVWD
WD 3 158-196 -Q---Q---PLT-------ELAA-HGDL-VQS-AVWS---R-D-GALVGT---A----CKDK----QLRIFD
WD 4 201-244 -P---R---ASQ-------STQA-HENS-RDSRLAWM---G-T-WEHLVS---TGFNQMRER----EVKLWD
WD 5 251-289 -A---L---ASL-------TLDT-SLGC-LVP-LLDP---D-S-GLLVLA---G----KGER----QLYCYE
WD 6 318-358 QA---L---AVM-------SCEVLRVLQ-LSD-TAIV---P-I-GYHVPR---K----AVEF----HEDLFP
WD 7 367-408 -T---D---PHS-------WWAG-DNQQ-VQK-VSLN---P-A-CRPHPSFTSC----LVPP----AEPLPD
WD 8 483-529 RD---S---HITNLKGLNLTTPG-ESDG-FCA-NKLR---V-A-VPLLSS---G----GQVA----VLELRK
WD 9 530-573 PGRLPD---TAL-------PTLQ-NGAA-VTD-LAWD---PFD-PHRLAV---A----GEDA----RIRLWR
WD10 584-623 -T---T---PET-------VLTG-HTEK-ICS-LRFH---PLA-ANVLAS---S----SYDL----TVRIWD
WD11 627-665 -G---A---DRL-------KLQG-HQDQ-IFS-LAWS---P-D-GQQLAT---V----CKDG----RVRVYR
WD12 670-713 -P---E---PLQ-------EGPG-PKGGRGAR-IVWV---C-D-GRCLLV---S----GFDSQSERQLLLYE
WD13 720-759 -G---P---LAV-------LGLD-VAPS-TLL-PSYD---P-DTGLVLLT---G----KGDT----RVFLYE
WD14 795-836 -V---E---LMR-------CLRL-RQSS-LEP-VAFRLPRV-R-KEFFQD---D----VFPD----TAVIWE
WD40 Template TG---E---CLR-------TLSG-HTSG-VTS-VSFS---P-D-GKRLVS---G----SEDG----TIKVWD