Input parameters:
Query = ENSP00000251289 (Len=432)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000251289, Len=432):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAAPMEVAVCTDSAAPMWSCIVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQLGKNYISAWELQRKDQLQQKIMCP 80
WD40-rpts (_________________WD 1________________) (__________
Query 81 GPVTCLTASPNGLYVLAGVAESIHLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVLQADPSR 160
WD40-rpts ______WD 2________________) (_________________WD 3________________)
Query 161 IPAPRHVWSHHALPITDLHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGSEGSIF 240
WD40-rpts (________________WD 4_______________) (________________WD 5______________
Query 241 QVDLFTWPGQRERSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSKQCIRTVALKGPVTNAAILL 320
WD40-rpts __) (_________________WD 6________________) (________________WD
Query 321 APVSMLSSDFRPSLPLPHFNKHLLGAEHGDEPRHGGLTLRLGLHQQGSEPSYLDRTEQLQAVLCSTMEKSVLGGQDQLRV 400
WD40-rpts 7________________) (__________________WD 8______________
Query 401 RVTELEDEVRNLRKINRDLFDFSTRFITRPAK 432
WD40-rpts ___)
8 WD40-repeats found in QUERY=ENSP00000251289 (Len=432):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 28-66 8.51 466.28 3.2e-05 20.0% 54.18
WD 2: Seg 7 70-107 7.25 414.06 0.00016 22.5% 54.60
WD 3: Seg 11 111-149 9.72 516.05 6.9e-06 32.5% 56.20
WD 4: Seg 15 166-202 7.13 409.02 0.00019 25.0% 49.60
WD 5: Seg 18 206-243 7.37 418.98 0.00014 22.5% 57.81
WD 6: Seg 22 259-297 9.36 501.47 1.1e-05 40.0% 47.07
WD 7: Seg 25 301-338 6.42 379.99 0.00047 15.0% 45.47
WD 8: Seg 29 364-404 7.51 424.69 0.00012 15.0% 51.35
Multiple sequence alignment of 8 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 28-66 -GA-NLLTYRGGQAGPRGL--ALLNGEYLLAAQLGKNYISAWE
WD 2 70-107 -KD-QLQQKIMCPGPVTCL--TASPNGLYVLAGV-AESIHLWE
WD 3 111-149 -GN-LLVILSRHYQDVSCL--QFTGDSSHFISGGKDCLVLVWS
WD 4 166-202 ------HVWSHHALPITDLHCGFGGPLARVATSSLDQTVKLWE
WD 5 206-243 -GE-LLLSVLFDVS-IMAV--TMDLAEHHMFCGGSEGSIFQVD
WD 6 259-297 -QD-AGKVFKGHRNQVTCL--SVSTDGSVLLSGSHDETVRLWD
WD 7 301-338 -KQ-CIRTVALK-GPVTNA--AILLAPVSMLSSDFRPSLPLPH
WD 8 364-404 HQQGSEPSYLDRTEQLQAV--LCSTMEKSVLGGQDQLRVRVTE
WD40 Template TGE-CLRTLSGHTSGVTSV--SFSPDGKRLVSGSEDGTIKVWD